CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAAGAAGTTTGACTCCAGAGAACCAAATAACGATATTATAAAATGGG
CAACAAAGCTAAACAGAGCTTTCTCAACTGATTAAACTCAAATGGCCAAG
AAGCACTTTATAATATGTTCATCATCCTTAGACATCAGGGCAATGAAAAT
CAAACAACCCTGGTATTCCACATCACACCAGTCAGAGTGGCTAAGATCCA
AAACTCAAGTGAAAGCAGATGCTGGAGAGGATATTCATAATGAGGAACAC
TCTTCCATTGCTGGTGGAATTGCATGTTGGTACAATTACACTGCAAATCA
GGTTGGTGCTTTCTGAGAAATAGTACTACAAGAAGAAGTGGTATATATAT
ATATATATATATATATATATATATATATATATATATATATATATATATAT
ATCCATTTATTCTCTTTTTGTTTCCACGCGCGCGCGTGAGAGCTTGCGCC
GTTGCGTATGCACTTCTATCTATTTATTGAGTCCTATTGTGAGCGTCACC
CCGACCCCACGCGCCTGTTGATGTCTTCGTACCCTATCTCTATTACCCCC
CCTTACCATTTTTTCCCCCCCCCCCTACTTTTCCTCCTATCCTTCTCCCC
CATTTTTTTTCTCCCAACCCCTCCTAAACCCCCCCTATCCCTCCTTACCC
TAGCTCCCCCCCG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCGGTCTGAAGTGGTCCTACAGAATA
GAAGAGGGTTAAATTTACTGTTCCTCCAACAGGGAGGATTTTGTCCTGCC
CTCAATGAAGTATGTTGCTTTTATATAGACCATTCTGGGATTGTTAAAGC
TCAATGGCCAAGGTGAAAGAAGAGCTAGCCAAGCAGAAGAGAGAAAGAGA
AGAGAGTCAGGGCTGGTTTGAGTCTTGGTTTATTGCTCTCCCTTAGTTAG
CCACCATCATATTCTTGTTAGAATATGTTAGGACCTTGTTAGGGCCCTTA
ATTGATTTTCTGCTATTGCTAACCTTTGGAACACGCATATTGAACAAGCT
TATAGTCTTCACAAAAGAGAATCTCTGGGTACATTTGTGGTAACTAAATA
ATATGCAAAGTTATTCTTCACTGGTTCTGCAGAACAAATAGGACAAGACT
AGTGATATAAAGGAATGGTCAGTAGTGTTTGAGATAGTTGTGTAGAGAAC
TCTTGCCTGAAATGGACAAGGTCCTGATTCCAATTAGGAGCATATCAGAA
GTATACAAGAATAGCTTATATTAATACTTATATTAATAGCGTATATAAAT
ACTGGGCATATTTCTGAAACCTCTGTAATACCATTACAATTGGGATGGTA
TN

Query= MSMg01no047_c03.g1 MSMg01no047_c03.g1 CHROMAT_FILE:
MSMg01no047_c03.g1 PHD_FILE: MSMg01no047_c03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:26 2005
         (617 letters)



>mm_chr3_4385456_4386472
          Length = 1017

 Score = 1000 bits (517), Expect = 0.0
 Identities = 529/533 (99%)
 Strand = Plus / Minus

                                                                       
Query: 85  agtatgttgcttttatatagaccattctgggattgttaaagctcaatggccaaggtgaaa 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 agtatgttgcttttatatagaccattctgggattgttaaagctcaatggccaaggtgaaa 893

                                                                       
Query: 145 gaagagctagccaagcagaagagagaaagagaagagagtcagggctggtttgagtcttgg 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 gaagagctagccaagcagaagagagaaagagaagagagtcagggctggtttgagtcttgg 833

                                                                       
Query: 205 tttattgctctcccttagttagccaccatcatattcttgttagaatatgttaggaccttg 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 tttattgctctcccttagttagccaccatcatattcttgttagaatatgttaggaccttg 773

                                                                       
Query: 265 ttagggcccttaattgattttctgctattgctaacctttggaacacgcatattgaacaag 324
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 772 ttagggcccttaattgattttctgctattgctaacctttggaacatgcatattgaacaag 713

                                                                       
Query: 325 cttatagtcttcacaaaagagaatctctgggtacatttgtggtaactaaataatatgcaa 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 cttatagtcttcacaaaagagaatctctgggtacatttgtggtaactaaataatatgcaa 653

                                                                       
Query: 385 agttattcttcactggttctgcagaacaaataggacaagactagtgatataaaggaatgg 444
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 652 agttattcttcactggttctgcagaacagataggacaagactagtgatataaaggaatgg 593

                                                                       
Query: 445 tcagtagtgtttgagatagttgtgtagagaactcttgcctgaaatggacaaggtcctgat 504
           ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 592 tcagtagtgtttgggatagttgtgtagagaactcttgcctgtaatggacaaggtcctgat 533

                                                                       
Query: 505 tccaattaggagcatatcagaagtatacaagaatagcttatattaatacttatattaata 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tccaattaggagcatatcagaagtatacaagaatagcttatattaatacttatattaata 473

                                                                
Query: 565 gcgtatataaatactgggcatatttctgaaacctctgtaataccattacaatt 617
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gcgtatataaatactgggcatatttctgaaacctctgtaataccattacaatt 420


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space:   611249
Effective search space used:   611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)