Query= MSMg01no048_m04.b1 MSMg01no048_m04.b1 CHROMAT_FILE:
MSMg01no048_m04.b1 PHD_FILE: MSMg01no048_m04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:10:03 2005
(682 letters)
>mm_chr3_112738701_112739783
Length = 1083
Score = 1243 bits (643), Expect = 0.0
Identities = 673/683 (98%), Gaps = 3/683 (0%)
Strand = Plus / Plus
Query: 1 attgatttggcattcaggaaacaaatcagaacct-tattcaccctttggacaagagatga 59
||||||||||||||||||||||||||||||| | ||||||||||||||| |||||||||
Sbjct: 201 attgatttggcattcaggaaacaaatcagaa-atgtattcaccctttggataagagatga 259
Query: 60 agttaattgagtatttatttattcatcttttccttctacaaataaaggaataaaagaaca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agttaattgagtatttatttattcatcttttccttctacaaataaaggaataaaagaaca 319
Query: 120 gtaattaagtgtcctaaaggtattatgtccaagaaaaaaagtaccaagcatagcaagtaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtaattaagtgtcctaaaggtattatgtccaagaaaaaaagtaccaagcatagcaagtaa 379
Query: 180 atatttaccaggttgtgtaaacagtggtaattgtttgtacagaatttattatgcagcaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atatttaccaggttgtgtaaacagtggtaattgtttgtacagaatttattatgcagcaca 439
Query: 240 attctaaatgtgaaccaaagttctaaggcttttattgaaacaaaatattatattcagatt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 attctaaatgtgaaccaaagttctaaggcttttattgaaacaaaatattatattcagatt 499
Query: 300 tgagtcaaactaatgatgatgtatttgatgtatgtatgcgtacgtatatatgtttactca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgagtcaaactaatgatgatgtatttgatgtatgtatgcgtacgtatatatgtttactca 559
Query: 360 ggtttacaaaaaaaaa-ccatgaaaaaaaaataagttcttagacttaaagcattttccta 418
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agtttacaaaaaaaaaaccatgaaaaaaaaataagttcttagacttaaagcattttccta 619
Query: 419 aatgctaaataatttaactgtgagtctgcacttatttgctcctcaaccccaatggagacc 478
|||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||
Sbjct: 620 aatgctaaataatttaactgtgagtctgtacttatctggtcctcaaccccaatggagacc 679
Query: 479 tttgaagcaataaatattatttgtgtatgcaggaagcataggaaaacagcttctaaatat 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tttgaagcaataaatattatttgtgtatgcaggaagcataggaaaacagcttctaaatat 739
Query: 539 taaagaaatgacagaaacagttgactgtctggacagtccctaatattctttatagcactg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 taaagaaatgacagaaacagttgactgtctggacagtccctaatattctttatagcactg 799
Query: 599 gagcatctatctacagccttctggcacagaatactagacagactttaagcgaagcaggaa 658
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 800 gagcatctatctacagccttctggcacagaatactagacagactttaagtgaagcaggaa 859
Query: 659 ttatgaaggactagcttatcctg 681
|||||||||||||||||||||||
Sbjct: 860 ttatgaaggactagcttatcctg 882
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1083
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1073
Effective search space: 721056
Effective search space used: 721056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no048_m04.g1 MSMg01no048_m04.g1 CHROMAT_FILE:
MSMg01no048_m04.g1 PHD_FILE: MSMg01no048_m04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:10:04 2005
(676 letters)
>mm_chr3_112863379_112864453
Length = 1075
Score = 777 bits (402), Expect = 0.0
Identities = 420/426 (98%), Gaps = 1/426 (0%)
Strand = Plus / Minus
Query: 1 atcaatctaaaccaaatcaaaaaacactttgaagatatgtctatacaattctccaccccc 60
|||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 425 atcaatctaaactaaatcaaaaaacactttgcagatatgtctatacaattctccaccccc 366
Query: 61 aacaactttttttagaaagtgaagagaaacataaaggaggaaaagctgcaaacccaggta 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 365 aacaactttttttagaaagtgaagagaaacataaagggggaaaagctgcaaacccaggta 306
Query: 121 gcactgaccagatgtgctgaagccatggttctttaaggaagagaactgatacaaggagta 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 305 gcactgaccagatgtgctgaagccatggttctttaaggaacagaactgatacaaggagta 246
Query: 181 taaatattaaaagtgcatttcttacactgtttcacagggcaacaatggaaatgaggaaag 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 245 taaatattaaaagtgcatttcttacactgtttcaca-ggcaacaatggaaatgaggaaag 187
Query: 241 gggataacatttgaaatgtaaataaagaaaattgtctattccatagatctacctgcgtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 gggataacatttgaaatgtaaataaagaaaattgtctattccatagatctacctgcgtgt 127
Query: 301 aactgtaccaataacatgcagcttttaatcatgattgctgtgtagtacagcttgaggtta 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 aactgtaccaataccatgcagcttttaatcatgattgctgtgtagtacagcttgaggtta 67
Query: 361 gggatggtgattcccgcaaaagttttttttattgttgagaatagttttcactattctggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 gggatggtgattcccgcaaaagttttttttattgttgagaatagttttcactattctggg 7
Query: 421 tttttt 426
||||||
Sbjct: 6 tttttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1075
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1065
Effective search space: 709290
Effective search space used: 709290
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
