Query= MSMg01no052_f12.b1 MSMg01no052_f12.b1 CHROMAT_FILE:
MSMg01no052_f12.b1 PHD_FILE: MSMg01no052_f12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:56 2005
(589 letters)
>mm_chr3_138684446_138685434
Length = 989
Score = 1069 bits (553), Expect = 0.0
Identities = 577/585 (98%)
Strand = Plus / Minus
Query: 5 gaattcacaaaggttgcagaaaaaaacttcctgtcctgaattgataccattgaaactaag 64
||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 gaattcacaaaggatgtaggaaaaaacttcctgtcctgaattgataccattgaaactaag 730
Query: 65 actaaaaataagtggttgtcctgtggttgatggattaagaaaactctctttgtggtatga 124
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 729 actaaaaataagtggttgtcctgtggttgatggattaagaaaactctatttgtggtatga 670
Query: 125 ctggaaataaacaaatagtgctgtagtgaattgtgcacattaaatctggaggtaaaggca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ctggaaataaacaaatagtgctgtagtgaattgtgcacattaaatctggaggtaaaggca 610
Query: 185 gcttattcagcaaaagatagtttagaggaaaggtccaatgtatatgagtgagctttcatt 244
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 609 gcttattcagcaaaagatagtttagaggaaaggtccaatgtgtatgagtgagctttcatt 550
Query: 245 ataggtaggggaagttcttgagtcatttgctgtcatttgaatagttcacatttgtattac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ataggtaggggaagttcttgagtcatttgctgtcatttgaatagttcacatttgtattac 490
Query: 305 tgaacttaatagaaggcattttttctttctttcagatgcagaaacaagtgaaaaaataca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tgaacttaatagaaggcattttttctttctttcagatgcagaaacaagtgaaaaaataca 430
Query: 365 aggaagtggaattcttcagttgtttgcaaatctgttgacgccacaggcctcctgcacagc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aggaagtggaattcttcagttgtttgcaaatctgttgacgccacaggcctcctgcacagc 370
Query: 425 caaagtagccaacatcatagcagaagtagccaaaaatggtgaggtttctgctcggaacat 484
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 369 caaagtagccgacatcatagcagaagtagccaaaaatggtgaggtttctgctcgcaacag 310
Query: 485 cttcagttttacaccttacttgtcagtatgtttcattaatttatgttttgatttcctaca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 cttcagttttacaccttacttgtcagtatgtttcattaatttatgttttgatttcctaca 250
Query: 545 ttagatgttttctactttttctttgactttgttactattttaggt 589
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ttagatgttttctactttttctttgactttgttactattttaggt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space: 566841
Effective search space used: 566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no052_f12.g1 MSMg01no052_f12.g1 CHROMAT_FILE:
MSMg01no052_f12.g1 PHD_FILE: MSMg01no052_f12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:56 2005
(299 letters)
>mm_chr3_138565099_138565798
Length = 700
Score = 532 bits (275), Expect = e-155
Identities = 293/299 (97%), Gaps = 1/299 (0%)
Strand = Plus / Plus
Query: 1 attctgctgtctaacttggtttccttt-ccccttttttttttagatttttgccatatgcc 59
||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 201 attctgctgtctaacttggtttcctttcccccttttttttttagatttttgggatatgcc 260
Query: 60 tggcacagaatttggtgagtgacattgaagctgtcagggctagctggtagacccctgcga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggcacagaatttggtgagtgacattgaagctgtcagggctagctggtagacccctgcga 320
Query: 120 ccactgctgtcagacactggactgatcccccctcactgactgaccctctgtgcaccggcc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 ccactgctgtcagacactggactgatcccccctcactgactgaccctctgtgcgccggcc 380
Query: 180 ggccgatggcgggctgtagagacctggtcacaggcctacagtctcacctgatggagctgc 239
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggctgatggcgggctgtagaggcctggtcacaggcctacagtctcacctgatggagctgc 440
Query: 240 caagaacttaactttctgtgggggtagaactgggaaatgctgctcacagacggaacttg 298
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caagaacttaactttctgtgggggtagaactgggaaatgctgctcacagacggaacttg 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 700
Length adjustment: 9
Effective length of query: 290
Effective length of database: 691
Effective search space: 200390
Effective search space used: 200390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|