Query= MSMg01no056_c05.b1 MSMg01no056_c05.b1 CHROMAT_FILE:
MSMg01no056_c05.b1 PHD_FILE: MSMg01no056_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:43 2005
(215 letters)
>mm_chr3_117378220_117378834
Length = 615
Score = 398 bits (206), Expect = e-115
Identities = 212/214 (99%)
Strand = Plus / Plus
Query: 2 gaaggggctctgaataaaactgaataagtatccccaaactgagtgggtaactgttttatg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gaaggggctctgaataaaactgaataagtatccccaaactgagtgggtaactgttttatg 261
Query: 62 tcaaaacaataaatataaataaacaaacagttggcaggatggctctcccagagaacccag 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tcaaaacaataaatataaataaacaaacagttggcaggatggctctcccagagaacccag 321
Query: 122 gtgtggttctcagctcctgctcagcagtgtacagcttcctgaatatccagtttcacaaga 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gtgtggttctcagctcctgctcagcagtgtacagcttcctgaatatccagtttcacaaga 381
Query: 182 tctgatacatattgtcttttggattctttgggta 215
||||||||||| |||||||||||||||||||||
Sbjct: 382 tctgatacatacagtcttttggattctttgggta 415
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 215
Length of database: 615
Length adjustment: 9
Effective length of query: 206
Effective length of database: 606
Effective search space: 124836
Effective search space used: 124836
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no056_c05.g1 MSMg01no056_c05.g1 CHROMAT_FILE:
MSMg01no056_c05.g1 PHD_FILE: MSMg01no056_c05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:57:43 2005
(183 letters)
>mm_chr3_117502809_117503398
Length = 590
Score = 269 bits (139), Expect = 8e-77
Identities = 178/199 (89%), Gaps = 16/199 (8%)
Strand = Plus / Minus
Query: 1 gttattgttttttccacccagcatagtctaaatatgctttcctggaag---------aat 51
||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 447 gttattgttttttccacccagcatagtctaaatatgcttccctggaagactatttaaaat 388
Query: 52 ac-tgtctctaatactgcctctggcaaaaaaa-----aaa-aaatatatgaaattggtaa 104
|| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 387 acatgtctctaatactgcctctggcaaaaaaataaataaataaatatatgaaattggtaa 328
Query: 105 attagggaatatatactaaatagctaaaataattatgatcttatatgtagcttaaattta 164
|||||||||| ||||||| ||||||||||||||||||| | |||||||||||||||||||
Sbjct: 327 attagggaatttatactatatagctaaaataattatgaccgtatatgtagcttaaattta 268
Query: 165 gtagttatttcttttgaaa 183
|||||||||||||||||||
Sbjct: 267 gtagttatttcttttgaaa 249
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 183
Length of database: 590
Length adjustment: 8
Effective length of query: 175
Effective length of database: 582
Effective search space: 101850
Effective search space used: 101850
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
