NACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAGAGTATTCCCAATGCATGCTTTATAAATTATATATTGATGA
GTTCTTCCAATATGGATGCTGACATAATTCCTCTCAGTTTTCAGGGAAAG
CACTGAATTGTTGATATGAAGAAAGAACTTTGAAACCACATCTACAACCG
CCTTTTGGCACTAGCATAAAGTCTTTCTGAATCAAAAATTAAACATGTTC
AACACAGAGGCTATCCCTTTCATTTTCTGCTTTTACTTATTTATGCAATA
TCACTTTATCTTGGTTCCATAATGTATTTTTTCTTTCAAATAGGCTCACA
GTCTTTTCTTTTTCCCACAGCATTCCATTTTGTAACAGTACTCATTTGCC
ATTTCAATTTAACTCCATAATAAATTTCTATTCATTCCTATTCTTCTATT
TAATTGAAAAAAATATTAGTACAATAAATTCTGATTGTGGCTACTGCTCC
CAAAACTTCTCCCAGACCTTCCCCAATTCCCTTACCATCCACCATTTCTT
GTTCTAACTTCTTAGAATATATACAGACATCTAAATTAATAATAATAATA
ATAATAGATTAAATTAATTATGATAAAAACAAACAGACCTAAATTAGACA
AATAATCAAACAGAAAAAAAAGAATCAAAGATAAAGATCAAAAAA

CACAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGA
GAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAA
TCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATC
AAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAAC
ACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAAT
CAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCA
GCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAA
GGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAA
GCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATG
TGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATT
TATGAAATTCCTATGCAAATGGATGGACCTGGAGGGCATCATCCTGAGTG
AGGTAACACATTCACAAAGGAAGTCACACAATATGTACTCACTGATAAGT
GGATATTAGCCCCAAACCTAGGATACCCAAGATATAAGATAC

Query= MSMg01no058_d23.b1 MSMg01no058_d23.b1 CHROMAT_FILE:
MSMg01no058_d23.b1 PHD_FILE: MSMg01no058_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:27 2005
         (604 letters)



>mm_chr3_5763472_5764475
          Length = 1004

 Score = 1122 bits (580), Expect = 0.0
 Identities = 595/600 (99%), Gaps = 1/600 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagagtattcccaatgcatgctttataaattatatattgatgagttcttccaata 64
           |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gaattcagagtattcaaaatgcatgctttataaattatatattgatgagttcttccaata 541

                                                                       
Query: 65  tggatgctgacataattcctctcagttttcagggaaagcactgaattgttgatatgaaga 124
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 540 tggatgctgacataattcctctcaattttcagggaaagcactgaattgttgatatgaaga 481

                                                                       
Query: 125 aagaactttgaaaccacatctacaaccgccttttggcactagcataaagtctttctgaat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 aagaactttgaaaccacatctacaaccgccttttggcactagcataaagtctttctgaat 421

                                                                       
Query: 185 caaaaattaaacatgttcaacacagaggctatccctttcattttctgcttttacttattt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 caaaaattaaacatgttcaacacagaggctatccctttcattttctgcttttacttattt 361

                                                                       
Query: 245 atgcaatatcactttatcttggttccataatgtattttttctttcaaataggctcacagt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 atgcaatatcactttatcttggttccataatgtattttttctttcaaataggctcacagt 301

                                                                       
Query: 305 cttttctttttcccacagcattccattttgtaacagtactcatttgccatttcaatttaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 cttttctttttcccacagcattccattttgtaacagtactcatttgccatttcaatttaa 241

                                                                       
Query: 365 ctccataataaatttctattcattcctattcttctatttaattgaaaaaaatattagtac 424
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 240 ctccataataaatttctattcattcctattcttctatttaattg-aaaaaatattagtac 182

                                                                       
Query: 425 aataaattctgattgtggctactgctcccaaaacttctcccagaccttccccaattccct 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aataaattctgattgtggctactgctcccaaaacttctcccagaccttccccaattccct 122

                                                                       
Query: 485 taccatccaccatttcttgttctaacttcttagaatatatacagacatctaaattaataa 544
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 121 taccatccaccatttcttgttctaccttcttagaatatatacagacatctaaattaataa 62

                                                                       
Query: 545 taataataataatagattaaattaattatgataaaaacaaacagacctaaattagacaaa 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  taataataataatagattaaattaattatgataaaaacaaacagacctaaattagacaaa 2


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space:   590436
Effective search space used:   590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)