ATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCACCTGTCGAATACTGAATGGCTGAGAAGCACCTGAAAAAATG
TACAGCATCCTTAATCATCACCCAAATGCAAATCAAAACAACCCTGAGGT
TCAACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGC
AGATGCTGGCCAGGATGTGGAGAAAGAGAAACGTTCCTCCATTGTTGGTG
GGATTGCAAGCTTGTACAACTATTCTGGAAATCAGTCTGTCAGTTCCTCA
GAAAATTGGACATAGTACTACCAGAGGATCCCGTATTACCTCATCTAGAA
GATGTTCTTTCTAGTATCACCCCCACCCGCTCCACTATGTTCATAGCAGC
CTTATTTATAATAGCCAGAAACTGAAAAGAACCTAGATGTCCCTCGACAG
AGGAATGGATACATAAAAATGTGGTACATTTACACAATGGAGTACTGCTC
AGCTATTTTAAAAAAATGAATTTATGAAATTCCTTGGCAAATGGATGGAC
CTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCACAAAAGAACTCACA
TGATATGTACTCACTGATAAATGGATATTAGCCCAGAATCTTAGAATACC
CAAGATATAAGATACAATTTGCAAAACACATGAAACTCAAGAAGAACAAG
ACCAN

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGTTCTGAGCCCCATTTTT
TAATGGGGTTATTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATAT
ATGTTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTC
CTAATCTGTTGGTGTGTTCATGTCCTTTACCCTGATCCTCATCATCCCAT
TTTTGTCAATCTTCATACTGCATGAACAATACATTTCATATAATTCTCTG
TAGATGAATATTCTTCCTTCTGGGAACAGAGTTGTGAGCTCATATATATG
ATATGATTATATAATCATTATACCATTGGTGGATTACTGAAAATAAATGT
TGAATAGATCCAAGTACTTTACTATTTCTATTTCATGTTCAATATATGAA
AGTAATGCAAGATTTATAATAGTAATAATATATATGATAATGTACAACAA
TATATAATATAATACATATAGTATATGATATATAATATACTATATTATAC
ATTAATACATATAATAATATAAATAATAATAATGAAAGAAAATAATGCAA
GGTTTACTTAAGATACTGCATGAGTGATGTTTCAAATATGTTTGAAGTTC
AATAGTGGTAAAATTTATGCTGAGTCCTTATAATCAAATTTTCTCTGCAN

Query= MSMg01no058_f19.g1 MSMg01no058_f19.g1 CHROMAT_FILE:
MSMg01no058_f19.g1 PHD_FILE: MSMg01no058_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:35 2005
         (626 letters)



>mm_chr3_91099802_91100827
          Length = 1026

 Score = 1185 bits (613), Expect = 0.0
 Identities = 622/625 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttgttcagttctgagccccattttttaatggggttatttgattttctgaagtccacctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgttcagttctgagccccattttttaatggggttatttgattttctgaagtccacctt 260

                                                                       
Query: 61  cttgagttctttatatatgttggatattagtcccctatctgatttaggataggtaaagat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgagttctttatatatgttggatattagtcccctatctgatttaggataggtaaagat 320

                                                                       
Query: 121 cctttcctaatctgttggtgtgttcatgtcctttaccctgatcctcatcatcccattttt 180
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctttcccaatctgttggtgtgttcatgtcctttaccctgatcctcatcatcccattttt 380

                                                                       
Query: 181 gtcaatcttcatactgcatgaacaatacatttcatataattctctgtagatgaatattct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcaatcttcatactgcatgaacaatacatttcatataattctctgtagatgaatattct 440

                                                                       
Query: 241 tccttctgggaacagagttgtgagctcatatatatgatatgattatataatcattatacc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tccttctgggaacagagttgtgagctcatatatatgatatgattatataatcattatacc 500

                                                                       
Query: 301 attggtggattactgaaaataaatgttgaatagatccaagtactttactatttctatttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attggtggattactgaaaataaatgttgaatagatccaagtactttactatttctatttc 560

                                                                       
Query: 361 atgttcaatatatgaaagtaatgcaagatttataatagtaataatatatatgataatgta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atgttcaatatatgaaagtaatgcaagatttataatagtaataatatatatgataatgta 620

                                                                       
Query: 421 caacaatatataatataatacatatagtatatgatatataatatactatattatacatta 480
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caacaatatataatataatatatatagtatatgatatataatatactatattatacatta 680

                                                                       
Query: 481 atacatataataatataaataataataatgaaagaaaataatgcaaggtttacttaagat 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atacatataataatataaataataataatgaaagaaaataatgcaaggtttacttaagat 740

                                                                       
Query: 541 actgcatgagtgatgtttcaaatatgtttgaagttcaatagtggtaaaatttatgctgag 600
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 741 actgcatgagtgatgtttcaaatatgtttgaagttcaatagtggtaacatttatgctgag 800

                                    
Query: 601 tccttataatcaaattttctctgca 625
           |||||||||||||||||||||||||
Sbjct: 801 tccttataatcaaattttctctgca 825


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space:   625856
Effective search space used:   625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)