TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAAGAGGAGCCGCGGA
ATTCACTCTTGTCACTTTCCTGTAAGGCTTGTTTACTAGTTAGGTGCAGT
GGAAGCCAGCGCCATCTTATAATGGTGATTGCTCACTGCACGGCTCTCCA
CAGTGCTGTAAGATCGAGAATCAATAAATGGAACCTCACAAACTTGTAAA
AACTGTAAGACAAAAGACACTATCAATATCAGAAGGGCTACGTTAAAAAA
TTCAGGTGACAGTAGATGCTGGTGAGGATATGGAGAAAGAGGCACACTCC
TCCATTGCTAGTGGGATTGCAAGCTGGTACAACCACTCTGGAAATCCAGT
CTGACAGTTCCTCAGAAAATTGGACATAGTATTACAGGAGGATTCTGCAA
TACTTCTGGCATATACCCAGAAGATGTTCCAACTTGTAATAAGGACACAT
GCTATTTTCATAGCAGCCTTATTTATAATAGCGAGAAGCTGGAAAGAACC
TAGATGTCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACA
CAATGGAGTACTACTGAGCTATTAAAAACAATGAATTAATGAAATTCTTA
GGCAAATGAATGGATCTGGAGGATATCAACCTGAGTGAGATAACCCAATC
ACAAAAGAACACACATGATATGCACACACTGATAATTGGATATTAGCCCA
GAATACCC

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXATTTTCAGAGAAATCGGACTGCAGGCTGG
AGAAAGCGTTTCTTGTAGGCAGAGCTACCCGGGATGGCAGGATGAGGAAG
AGGTGTGAGGAGCTGCGGGGGTCCCTCGCACTTGATCGGAGCCTGAGAGG
GCAATGTTCCCATCCTTCAGGAAGGCCTGACAGGGGCCCCACGTTAGCAA
TTGCTTTAGCTAAAATTCAGCTGCACACTCCAACCGCGAGACTCTAAATT
GCCAGACACAGACCTAGATTTGAGTAACACTAAAAGAGAAAAAATAAATA
AATAAAATAAAATAAAATACAATAAAATAAAATAAAATAAAATAAAATAA
AATAAGTGTGAGTTTCTGTAATACATCGTGAGCTGGATTCCCAAGGTTAC
CACCAGCATTAAAAAAAAATCTCATAACTCAAACTAAATTCTTTAGTATA
CATGTTCACATTTATACTCAAAACAAGTCCTAACTGTTTATTCTAAGATG
ACAAAATAATCTATTCTAGTGTTAAATGTCCCTAGTCTTTTTTTCCCCCT
CAATTTGTGGCCTAAATTTCTGATGCTTCCAAACACTGGCTCACCTGCGT
GTGATTTCGCACACTCAGTAACCTAAGACTGCAGACTTTGGCTAAAGTCC
AGCCCT

Query= MSMg01no059_b13.g1 MSMg01no059_b13.g1 CHROMAT_FILE:
MSMg01no059_b13.g1 PHD_FILE: MSMg01no059_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:31 2005
         (530 letters)



>mm_chr3_136343778_136344708
          Length = 931

 Score =  799 bits (413), Expect = 0.0
 Identities = 466/489 (95%), Gaps = 12/489 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   attttcagagaaatcggactgcaggctggagaaagcgtttcttgtaggcagagctacccg 60
           |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 attttcagagatttcggactgcaggctggagaaagcgtttcttgtaggcagagctacccg 420

                                                                       
Query: 61  ggat--ggcaggatgaggaagaggtgtgaggagctgcgggggtccctcgcacttgatcgg 118
           | ||  |||||||||||||||||| ||||||||| ||||||||||||||||||||||| |
Sbjct: 419 gaatgaggcaggatgaggaagaggcgtgaggagcagcgggggtccctcgcacttgatcag 360

                                                                       
Query: 119 agcctgagagggcaatgttcccatccttcaggaaggcctgacaggggccccacgttagca 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 agcctgagagggcaatgttcccatccttcaggaaggcctgacaggggccccacgttagca 300

                                                                       
Query: 179 attgctttagctaaaattcagctgcacactccaaccgcgagactctaaattgccagacac 238
           |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 299 attgctttagctaaaattcagctgcacactccaaccacaagactctaaattgccagacac 240

                                                                       
Query: 239 agacctagatttgagtaacactaaaagagaaaaaataaataaataaaataaaataaaata 298
           ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 239 agacctagacttgagtaacactaaaagagaaaaa-taaataaataaaataaaataaaata 181

                                                                       
Query: 299 caataaaataaaataaaataaaataaaataaaataagtgtgagtttctgtaatacatcgt 358
                |||||||||||||||||||||||    |||||||||||||||||||||| |||||
Sbjct: 180 -----aaataaaataaaataaaataaaa----ataagtgtgagtttctgtaatagatcgt 130

                                                                       
Query: 359 gagctggattcccaaggttaccaccagcattaaaaaaaaatctcataactcaaactaaat 418
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 129 gagctggattcccaaggttaccaccagcattaaaaaaaaatctcatgactcaaactaaat 70

                                                                       
Query: 419 tctttagtatacatgttcacatttatactcaaaacaagtcctaactgtttattctaagat 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69  tctttagtatacatgttcacatttatactcaaaacaagtcctaactgtttattctaagat 10

                    
Query: 479 gacaaaata 487
           |||||||||
Sbjct: 9   gacaaaata 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 530
Length of database: 931
Length adjustment: 10
Effective length of query: 520
Effective length of database: 921
Effective search space:   478920
Effective search space used:   478920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)