XXXXXXXXXXXXXXXXXXXXXXXXXTCAAAGAGGATCCGCGGAATTCTTT
CTTCCTGGAATGGAAATTGGTTTTCCCTGGATCACTGATCCAATCACTTC
TGAAACATGGAGTCTGTGACTGCAAGGTATGATTTGTTTGATGAAGGTGA
GAGAGTAAAGCCACAATTAGTGCATTCGTGGATTTTTTTCAATATAGAAA
TATATACTTAAAAATAAAACTTTCTCAAAGGAAATAACCTGCCTCTCTTT
GGTTCTCTGGTAAGATAATACTGCAACTTATAGGAAGTCACACTAAAATG
AGCTGAATTGAACAAATTAATAGGACTGTCTACTGGAGACAAATTACTCA
GGTTTTTTGGTCGTGGCATATGATTATATATCTTAGACATTTTTCTGAAG
CCCACAGAAGAGCTTTAAAGTGTGTTGAATTAATTTCAAAATGGAATTTT
TCTTTGTCCAATTGATGTGTTGTGAAAATGGAGCCTGTGCTATTAAAGAG
GAACAGAAACACCTCCTAGAACATTATGTTTAGAAAGTAGTCATAGATTT
AGTCACATAGATTCCTGAAGAAGCTAGACATTTCATTGTAGAGGAATGGA
TCCATGACAACTGCTCTCCTCCAGAACTAGGAGCATCAGTTTTTCAAGTT
CATGGAGAATATGATCCAAGATGCCTACTGAATTTCTGGACTCATAGAAA
TCAACTAGTCCTATACATTG

TGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCACCTGAGGAATACTGAATGGCAGAGAAGCAC
CTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAAC
AACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATT
CAGGTGACAGCAGATGCTGGTGTGGATCTGGAGAAAGAGGAACACTCCTC
CATTGTTGGTGGGATTGCAGGTTTGTACAACCACTCTGGAAATCAGTCTG
GAGGTTTCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATAC
CTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACA
TGCTCCACTATGTTCCTAGCAGCCTTATTTATAATAGCCAGAAGCTGGAA
AGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACA
TCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAA
TTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAAC
ACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATT
AGCCCCAAACCTAGGATACCCAAGATATAAGATACAATTTGCTAAACACA
TGAAACTCAAGAAGAATGAAGA

Query= MSMg01no061_a18.b1 MSMg01no061_a18.b1 CHROMAT_FILE:
MSMg01no061_a18.b1 PHD_FILE: MSMg01no061_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:55 2005
         (612 letters)



>mm_chr3_158596453_158597464
          Length = 1012

 Score = 1104 bits (571), Expect = 0.0
 Identities = 586/591 (99%)
 Strand = Plus / Minus

                                                                       
Query: 22  tggaatggaaattggttttccctggatcactgatccaatcacttctgaaacatggagtct 81
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 812 tggaatggaaattggttttccctggatcactgatccaatcacttttgaaacatggagtct 753

                                                                       
Query: 82  gtgactgcaaggtatgatttgtttgatgaaggtgagagagtaaagccacaattagtgcat 141
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 752 gtgactgcaaggtatgatttatttgatgaaggtgagagagtaaagccacaattagtgcat 693

                                                                       
Query: 142 tcgtggatttttttcaatatagaaatatatacttaaaaataaaactttctcaaaggaaat 201
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 tcgtggatttttttcaatatagaaatatatacttaaaaataaaactttctcaaaggaaat 633

                                                                       
Query: 202 aacctgcctctctttggttctctggtaagataatactgcaacttataggaagtcacacta 261
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 632 aacctgcctctctttggttctctgttaagataatactgcaacttataggaagtcacacta 573

                                                                       
Query: 262 aaatgagctgaattgaacaaattaataggactgtctactggagacaaattactcaggttt 321
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aaatgagctgaattgaacaaattaataggactgtctactggagacaaattactcaggttt 513

                                                                       
Query: 322 tttggtcgtggcatatgattatatatcttagacatttttctgaagcccacagaagagctt 381
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tttggtcatggcatatgattatatatcttagacatttttctgaagcccacagaagagctt 453

                                                                       
Query: 382 taaagtgtgttgaattaatttcaaaatggaatttttctttgtccaattgatgtgttgtga 441
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 taaagtgtgttgaattaatttcaaaatggaatttttctttgtccaattgatgtgttgtga 393

                                                                       
Query: 442 aaatggagcctgtgctattaaagaggaacagaaacacctcctagaacattatgtttagaa 501
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 aaatggagcctgtgctattaaagaggaacagaaacacctcctagaacattatgtttagaa 333

                                                                       
Query: 502 agtagtcatagatttagtcacatagattcctgaagaagctagacatttcattgtagagga 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 agtagtcatagatttagtcacatagattcctgaagaagctagacatttcattgtagagga 273

                                                              
Query: 562 atggatccatgacaactgctctcctccagaactaggagcatcagtttttca 612
           ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 272 atggatccatgacaattgctctcctccagaactaggagcatcagtttttca 222


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space:   603204
Effective search space used:   603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)