XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCCAGAATCCGCGGAATTCTT
CACGTCAAGCTGTCTCCATCAACTGGTTCTTTTCCACATCTAAGCTACTA
TGGTCCCTGTCTATGGACCTAACTATTATCTTCATTGTCTATTCTGTCTT
CCAACAAACTAGTCTATACCCTTTGTAACATCCCAAAGTACTCCCTTAAA
TTTCTAATATTGGTAGCTCTAAGTATATCATTATTCATGTACTGTTCATA
ACCCAAGTTTTACCTCAGCTTATCTGTATCCTGTTTCCTAACTCCATGAG
TTTAAACAGTTTGTAATGTGCCAAGAGATTATTTCCTGTGACATTTCTGC
AATTCCTTTACTGCCCTTTACTCTGAATTATCTTCTTGTGAACAAGCAAA
TAGCCAATGCCCACAAGAAAAAGAGAACACCTTCCTCCTCACAGAGAGGG
GAAATTGTATTTCTTTTTTTTAATTGGGTATTTTATTCATTTACATTACA
AATGCTATTCCGAAAGTCCCCCATACTCCCCCCCTCCAGCTCTCCTACCC
ACCTACTCCCACTTCTTGGACCTGGTGTTCCCTTGTACTGGGGTATATAA
AGTTTTCAAGACCAAGGGGCCTCTCTTCCCAATGATGTCCGACTAGGACA
TCTTCTGCTACATATGCAGCTAGAGACATGAGCTCTGGAGGTCTATTTCT
AAAGGAAAGCAAAAA

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTTCTTTGCCAATTTGTATACCATTTATCTAC
TTTTATTGTCTTATTGTTCTAGCTAGAACTTGAAGTACTATATTGAATTG
GGAGAGAGTATGAGCCTTGCCTTGCCTTGTCCCTGATTTTAGAGGGATTG
CATTGTTTATTTCCATTTAACTTGATGTTCGCTTTTGGTTTGCTGTATAT
TACTTTTATTATGTTTAGGCATGTGCAATGAATTCTTAAACTCTTCAAAA
CTTTAAACATGAAAGGATGTTGAATTTTATCAAAGGCTTTTTCAGTATCT
AATGATATGAGCATGTAATTCTTTTTTGAGCTAGTATATAAAGTGGATAA
TATTGATGGACCCCCATATATTGAAACTTCCTGGTATCCTTTGGATGAAG
CCTACTTTATCATGGTGAATGATGTCTTTGATGTGTTCTTAAATTCAATT
GGCATGGATTTTATTGAGAATATTTGCATTAATATTCATAAGCAAATTTG
GGCTGAAGTTCTCTTTTCTTGTATCTGTTGAGGCTAATTTTATGTCTGAT
TATATGGCCAATTTTGCAGAACATTCCAGGAGGTGCTGAGAATAAGGTAT
ATTCTATTGTTTTCGGTTAAAATGTTATGTACATATATGTTTAATCCATT
TTGTTCATAACTTCCTTTAGTTTN

Query= MSMg01no061_a24.b1 MSMg01no061_a24.b1 CHROMAT_FILE:
MSMg01no061_a24.b1 PHD_FILE: MSMg01no061_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:56 2005
         (372 letters)



>mm_chr3_43049256_43050027
          Length = 772

 Score =  648 bits (335), Expect = 0.0
 Identities = 359/367 (97%)
 Strand = Plus / Minus

                                                                       
Query: 6   ggaattcttcacgtcaagctgtctccatcaactggttcttttccacatctaagctactat 65
           |||||||||||||||||| || ||||||||||||||| ||||||||| ||||||||||||
Sbjct: 572 ggaattcttcacgtcaagttgcctccatcaactggttgttttccacaactaagctactat 513

                                                                       
Query: 66  ggtccctgtctatggacctaactattatcttcattgtctattctgtcttccaacaaacta 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ggtccctgtctatggacctaactattatcttcattgtctattctgtcttccaacaaacta 453

                                                                       
Query: 126 gtctataccctttgtaacatcccaaagtactcccttaaatttctaatattggtagctcta 185
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 452 gtctataccctttgtaacatcccaaagtgctcccttaaatttctaatattggtagctcta 393

                                                                       
Query: 186 agtatatcattattcatgtactgttcataacccaagttttacctcagcttatctgtatcc 245
           |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 392 agtatatcattattcatgtattgttcataacccaagttttatctcagcttatctgtatcc 333

                                                                       
Query: 246 tgtttcctaactccatgagtttaaacagtttgtaatgtgccaagagattatttcctgtga 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgtttcctaactccatgagtttaaacagtttgtaatgtgccaagagattatttcctgtga 273

                                                                       
Query: 306 catttctgcaattcctttactgccctttactctgaattatcttcttgtgaacaagcaaat 365
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 catttctgcaattcatttactgccctttactctgaattatcttcttgtgaacaagcaaat 213

                  
Query: 366 agccaat 372
           |||||||
Sbjct: 212 agccaat 206


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space:   276969
Effective search space used:   276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)