Query= MSMg01no061_i13.b1 MSMg01no061_i13.b1 CHROMAT_FILE:
MSMg01no061_i13.b1 PHD_FILE: MSMg01no061_i13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:32 2005
(606 letters)
>mm_chr3_135915759_135916764
Length = 1006
Score = 1112 bits (575), Expect = 0.0
Identities = 593/599 (98%), Gaps = 2/599 (0%)
Strand = Plus / Minus
Query: 5 gaattctttcagagctgaccaagttaagctatttcaatatcagatctgtcttgagaactc 64
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 gaattctttcagagctgataaagttaagctatttcaatatcagatctgtcttgagaactc 743
Query: 65 tacctttttaaaagccctagaagtcaagcaatcatataaggca-ttttaaacccagaatt 123
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 742 tacctttttaaaagccctagaagtcaagcaatcatataaggcatttttaaacccagaatt 683
Query: 124 atgctccaaattttcaaaataatctcagcctttggaccaaaaatagttatcgcagagaaa 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 682 atgctccaaattttcaaaataatctcagcctttggaccaaaaatagttatcgca-agaaa 624
Query: 184 tcttgggctttcagtaagtagatcttagtacaatttgaagcaccacagaaaagatcattt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tcttgggctttcagtaagtagatcttagtacaatttgaagcaccacagaaaagatcattt 564
Query: 244 ggttccagctgagtgaaaattgtgtttctggtttccctggagaatgttcagtatatgcca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ggttccagctgagtgaaaattgtgtttctggtttccctggagaatgttcagtatatgcca 504
Query: 304 atgatctgaaatgacaacctttgaacctcatttctgagaagccttctagatagtgggtgg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atgatctgaaatgacaacctttgaacctcatttctgagaagccttctagatagtgggtgg 444
Query: 364 gcagagaacagagaccaacgcttttcctaacaaagggactatagagatgtttctgggatc 423
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gcagagaacagagaccaatgcttttcctaacaaagggactatagagatgtttctgggatc 384
Query: 424 ctaaaacttccatagtctatcaatgatatccctgacagtttctaggcaagtggaagtgag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctaaaacttccatagtctatcaatgatatccctgacagtttctaggcaagtggaagtgag 324
Query: 484 cctcgttcatacctagcactgttgaaacccataggtctatatttctaacatgctgacatg 543
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cctcgttcatacctagcgctgttgaaacccataggtctatatttctaacatgctgacatg 264
Query: 544 accatgtgtttgataagggcacagacttccttccctattcagagaattagtcatttgct 602
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 accatgtgtttgataagggcacagacttccttccctattcagagaattagtcatttgct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no061_i13.g1 MSMg01no061_i13.g1 CHROMAT_FILE:
MSMg01no061_i13.g1 PHD_FILE: MSMg01no061_i13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:32 2005
(482 letters)
>mm_chr3_135779773_135780654
Length = 882
Score = 427 bits (221), Expect = e-124
Identities = 236/243 (97%), Gaps = 4/243 (1%)
Strand = Plus / Plus
Query: 1 tgtgatatatggaaggcactgccatgaaccaccacgtagctgatatctcagcattcagtc 60
||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgatatacggaaggcagtgccatgaaccaccacgtagctgatatctcagcattcagtt 260
Query: 61 tgagagtccccaacgatgctactgaatttatggccctatatattggtgagtgcatccatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagagtccccaacgatgctactgaatttatggccctatatattggtgagtgcatccatg 320
Query: 121 catggatgagttcattcattcattccataaataaatggatacacactatgtgccagggag 180
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 catggatgagttcattcattc----cataaataaatggatacacactatgtgccagggag 376
Query: 181 ggatccaggatacagccataaagaaaacaagatagagttttctgactatgtgctgccttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ggatccaggatacagccataaagaaaacaagatagagttttctgactatgtgctgccttt 436
Query: 241 gct 243
|||
Sbjct: 437 gct 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space: 411584
Effective search space used: 411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
