Query= MSMg01no062_b10.b1 MSMg01no062_b10.b1 CHROMAT_FILE:
MSMg01no062_b10.b1 PHD_FILE: MSMg01no062_b10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:05:19 2005
(693 letters)
>mm_chr3_150936479_150937571
Length = 1093
Score = 1301 bits (673), Expect = 0.0
Identities = 688/693 (99%)
Strand = Plus / Plus
Query: 1 gcgaaacactgagccagaaaaaagaaacgcatcctctacctattagagcataaagcaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcgaaacactgagccagaaaaaagaaacgcatcctctacctattagagcataaagcaaac 260
Query: 61 attgtaagatccactaaacgtccttacactaaatctagttgctattgttcattgatgtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attgtaagatccactaaacgtccttacactaaatctagttgctattgttcattgatgtta 320
Query: 121 ctattctgacacttaacatggggctgatatttctgttcaaaaagtagcagcctgataatc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 ctattctgacacttaacatggggctgatatttctgttcaaaaagtagcagcctggtaatc 380
Query: 181 tggtagattttatatatattatatattttatatatctctctccacacctagcccagggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggtagattttatatatattatatattttatatatctctctccacacctagcccagggtg 440
Query: 241 cctattcagtgtgctgagttagtagtgtattactgataaattcgaccctgagatttgata 300
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 441 cctattcagtgtgctgagttagtagtggatgactgataaattcgaccctgagatttgata 500
Query: 301 aaattccctatttgattccctatttgcatgtttgtcttttgtccaaacttcaggaagtaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaattccctatttgattccctatttgcatgtttgtcttttgtccaaacttcaggaagtaa 560
Query: 361 ctcaagttcacctcaaagtcacctcctccacagaaagtgtttctcatttccacaaagcaa 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcaagttcacctcaaagttacctcctccacagaaagtgtttctcatttccacaaagcaa 620
Query: 421 cgataatataccaaaatgcctctaaacactaatctcttaaccaagaaaatgcatttttga 480
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cgataacataccaaaatgcctctaaacactaatctcttaaccaagaaaatgcatttttga 680
Query: 481 attcaaaactctagatctatttttttctgagtattgtattttgattattttgaaattgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 attcaaaactctagatctatttttttctgagtattgtattttgattattttgaaattgga 740
Query: 541 ctttaaatcattttaatgtaaaaaattattttaatgagagctagcaaatcaatcaagggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctttaaatcattttaatgtaaaaaattattttaatgagagctagcaaatcaatcaagggt 800
Query: 601 aaggacaaattgttctttgtatttagttgaagacagtattttcctgttattttattataa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aaggacaaattgttctttgtatttagttgaagacagtattttcctgttattttattataa 860
Query: 661 tttaaaattttcaaacattgtaatttcatcact 693
|||||||||||||||||||||||||||||||||
Sbjct: 861 tttaaaattttcaaacattgtaatttcatcact 893
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1093
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1083
Effective search space: 739689
Effective search space used: 739689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no062_b10.g1 MSMg01no062_b10.g1 CHROMAT_FILE:
MSMg01no062_b10.g1 PHD_FILE: MSMg01no062_b10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:05:19 2005
(618 letters)
>mm_chr3_151097611_151098628
Length = 1018
Score = 741 bits (383), Expect = 0.0
Identities = 406/417 (97%), Gaps = 6/417 (1%)
Strand = Plus / Minus
Query: 1 tttacgattgcccattacaagatcaaaattattttaaaatgcattgtttgaggaagcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tttacgattgcccattacaagatcaaaattattttaaaatgcattgtttgaggaagcctg 352
Query: 61 tattgtggaaggggatagacatgggctcactgtataactctgaatccattgtctgtacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tattgtggaaggggatagacatgggctcactgtataactctgaatccattgtctgtacag 292
Query: 121 tatttcagaaagacattgaaatttttgaaaattttcaataaaaatattgtgtcattgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tatttcagaaagacattgaaatttttgaaaattttcaataaaaatattgtgtcattgaag 232
Query: 181 ggaagcattttaggagcagcaattacaaagggattgtgtgtgtgtgtgtgtgtgtgtgtg 240
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 231 ggaagcattttaggagcagcaattacaaaggaattgtgtgtgtgtgtgtatgtgtgtgtg 172
Query: 241 tgtgtgtgtgtgtgaatgaattccataatatgtggcctgatgcaaaatgaggtacctgat 300
|||||||| ||||||||||| || | |||||||||||||||||||||||||||||
Sbjct: 171 tgtgtgtg------aatgaattccagaagaggtggcctgatgcaaaatgaggtacctgat 118
Query: 301 tgctaggtagctggagttacaggcaattgtgagctgcctatgctaggttctgggaactga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 tgctaggtagctggagttacaggcaattgtgagctgcctatgctaggttctgggaactga 58
Query: 361 acctcagtcctctgcaagagcagtatttgttcttaagttcagagcaatctctccagc 417
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 acctcagtcctctgcaagagcagtatttgttcttaagttcagagcaatctctccagc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
