NNNNNNNNNNNNNNNNNNNNTTTTNNCCCCTTTNNNNNNCNCCTCATTCC
TNNNTTTCTCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTCTGAATAGACCTCTGTAAGTTATAGGCACGTACATCC
TCACGTGATGATACAAATTAATTCACATTTTAATTTTTATTTTTCCCTAA
GTTTTAACATAAAAATATAGTGCCATTGTGGAATGTACAAATGAGTGCTA
AAAAAATAACTATACTTCCAGAAAAATTAGAATTTTTAAGTTTAGGATAA
GAAACATCATTCACAACAAACAATATTCATAAAATCAGATATAAAATTTT
AAATTATATTTAACAAAAATAGAAATGAAAGATAAAGGTGGATATGTTTT
CTGTCTTGTGTCATTGACACATTTTGAATTAATTCCCTTCATCTATGACA
AGTGAGATTAGTAAATTTGACAGATACCATTGTTGTGAATATTCTGACAT
ATATTTTTATGAACAAATATTTATTATACAAAAATATACAAATGTAACAG
CATGAAACTGATATTTGAGTATCTGTAAAGTGGATACAACATATGTTAAC
ATATGATATCATTTTGATTTCTAAATTTGATTTATCTTTCACCTTTTAAT
ACTACTGGCTTCTGTCAGTGTTTATAACATGCCTTCCTCTTTTGATACTC
ATTCTGAGTCACCCAAAGATTCCTCATCCCTAGTGGCCGATTTTTACTTT
ATTGGCAG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXTTATCCACAATGATGACTATCTTTTTTCTACCCTATCAAGGAGTTA
TTTTTTGTTTGTTTTTAAATATAGGAAGCCGAAATAAGATTAAACATTTT
TGAAATGGAAAATATTTCAACTTTAATATTTATCTTTTCTTGAAAAACCT
CCTTACAGAGGAGAAGCACAATAACTAGCAAGTAGTTCTACTATAACTAA
AAACTGACTGTAAAGTGTTTTTATAGCAGGGGAGAGCATATAACAATAAA
CAAATATCAAATATATTTTAGCTGTTTTTCCCTCTTTTCTAAGATCATGC
TTATTCTTGCCTGAGAGCCAGCCTTTAATGGCTGAGCCAATTTAAAACCC
AGAAATGAACCAACACATGCATAGGCACTAGATCTTTGACAAAGGAGCTA
AAATCATACAGTGGACAAAAGGAAGGGTTTTCGACAAATGGTGCTATTTA
AACTGGAGGTCAGCATGAAGAAGAATGCAAATAGCCCTCTGAGGGATGAG
TGTGTGCACAGGTGGGGGAACACCCTCATAGAGGCAGGCGAATAAAGAAG
GTAATAAAGGGCTTGCGGAAGGCAAACTGCGAAGGGGATAGCTTTTTGCA
ATGTTAATCCCTATTTTAACCCCTAT

Query= MSMg01no063_g09.b1 MSMg01no063_g09.b1 CHROMAT_FILE:
MSMg01no063_g09.b1 PHD_FILE: MSMg01no063_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:44 2005
         (353 letters)



>mm_chr3_46707092_46707844
          Length = 753

 Score =  652 bits (337), Expect = 0.0
 Identities = 346/349 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctgaatagacctctgtaagttataggcacgtacatcctcacgtgatgatacaa 64
           |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctgaaaagagctctgtaagttataggcacgtacatcctcacgtgatgatacaa 264

                                                                       
Query: 65  attaattcacattttaatttttatttttccctaagttttaacataaaaatatagtgccat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attaattcacattttaatttttatttttccctaagttttaacataaaaatatagtgccat 324

                                                                       
Query: 125 tgtggaatgtacaaatgagtgctaaaaaaataactatacttccagaaaaattagaatttt 184
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 325 tgtggaatgtacaaatgagtgctaaaaaaataactatacttccagaaaaattagaaattt 384

                                                                       
Query: 185 taagtttaggataagaaacatcattcacaacaaacaatattcataaaatcagatataaaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taagtttaggataagaaacatcattcacaacaaacaatattcataaaatcagatataaaa 444

                                                                       
Query: 245 ttttaaattatatttaacaaaaatagaaatgaaagataaaggtggatatgttttctgtct 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttttaaattatatttaacaaaaatagaaatgaaagataaaggtggatatgttttctgtct 504

                                                            
Query: 305 tgtgtcattgacacattttgaattaattcccttcatctatgacaagtga 353
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtgtcattgacacattttgaattaattcccttcatctatgacaagtga 553


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space:   255936
Effective search space used:   255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no063_g09.g1 MSMg01no063_g09.g1 CHROMAT_FILE:
MSMg01no063_g09.g1 PHD_FILE: MSMg01no063_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:44 2005
         (464 letters)



>mm_chr3_46811579_46812442
          Length = 864

 Score =  866 bits (448), Expect = 0.0
 Identities = 460/464 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttatccacaatgatgactatcttttttctaccctatcaaggagttattttttgtttgttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ttatccacaatgatgactatcttttttctaccctatcaaggagttattttttgtttgttt 475

                                                                       
Query: 61  ttaaatataggaagccgaaataagattaaacatttttgaaatggaaaatatttcaacttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ttaaatataggaagccgaaataagattaaacatttttgaaatggaaaatatttcaacttt 415

                                                                       
Query: 121 aatatttatcttttcttgaaaaacctccttacagaggagaagcacaataactagcaagta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 aatatttatcttttcttgaaaaacctccttacagaggagaagcacaataactagcaagta 355

                                                                       
Query: 181 gttctactataactaaaaactgactgtaaagtgtttttatagcaggggagagcatataac 240
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gttctactataactaaaaactaactgtaaagtgtttttatagcaggggagagcatataac 295

                                                                       
Query: 241 aataaacaaatatcaaatatattttagctgtttttccctcttttctaagatcatgcttat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 aataaacaaatatcaaatatattttagctgtttttccctcttttctaagatcatgcttat 235

                                                                       
Query: 301 tcttgcctgagagccagcctttaatggctgagccaatttaaaacccagaaatgaaccaac 360
           |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 tcttggttgagagccagcctttaatggctgagccaatttaaaacccagaaatgaaccaac 175

                                                                       
Query: 361 acatgcataggcactagatctttgacaaaggagctaaaatcatacagtggacaaaaggaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 acatgcataggcactagatctttgacaaaggagctaaaatcatacagtggacaaaaggaa 115

                                                       
Query: 421 gggttttcgacaaatggtgctatttaaactggaggtcagcatga 464
           |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 114 gggttttcgacaaatggtgctatttaaactggaggtcaacatga 71


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space:   387716
Effective search space used:   387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)