ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TTGCCGGCCAGAACTAGCTTGGGCAAGAGTTTCCTTAGTTGTACAAAAGC
TTCATTAGTTTTATGAGGTCCCAGTTGTCAGTTACTGGCATTAGTTCTGA
AGAAACTTAAGCCACAGGAGTCAATAAAACTTCCCATGTGGACTAAAATC
CCAGTCAAGATTTTAAAAACTTATTTAGAAGAGTTGGTCATGGTAGTCCA
AGGATCTCCTAAAACAATATAGTTTACTTATATATGCTTTATTGAATCAC
AGGGTTGAGGCCACCCTCTGTTGCTGAAGCCACCACATACTTAGGACATT
TGAGTCAGATGACCAGAATTGAGAATGGCATAAAAGTCTCTTTCTTATGG
TCTAGCTTTCATGCTCTTAGAAAATAATGTATAAACTGCCATGTGAGGGA
AACAAATAGGCCCAGGGAACCACAATACTTATGAACCAAAGCAATTGACA
ACCTGGCAAAATATTCATAAAGTTGCAAGAAATGAAAGTTACATGTTGGT
AATTAGAGCAGTCTAATTGGCTTTTTGGTCTACTCATGAGGCCTGAGGAG
ACATGGAAAAGGGTATAAATACTAATAGAGCCAACATACCAGGAAATCTG
CTGTGATACAGTCTCTCTTAATAATGGTA

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTTTTAAAAAATGATTAGGATTCAAAATATT
GATTTGGCATTCAGGAAACAAATCAGAAATTTATTCACCCTTTGGATAAG
AGATGAAGTTAATTGAGTATTTATTTATTCATCTTTTCCTTCTACAAATA
AAGGAATAAGAGAACAGTAATTAAGTGTCCTAAAGGTATTATGTCCAAGA
AAAAAAGTACCAAGCATAGCAAGTAAATATTTACCAGGTTGTGTAAACAG
TGGTAATTGTTTGTACAGAATTTATTATGCAGCACAATTCTAAATGTGAA
CCAAAGTTCTAAGGCTTTTATTGAAACAAAATATTATATTCAGATTTGAG
TCAAACTAATGATGATGTATTTGATGTATGTATGCGTACGTATATATGTT
TACTCAGGTTTACAAAAAAAAACCATGAAAAAAAAATAAGTTCTTAGACT
TAAAGCATTTTCCTAAATGCTAAATAATTTAACTGTGAGTCTGTACTTAT
TTGGTCCTCAACCCCAATGGAGACCTTTGAAGCAATAAATATTATTTGCG
TATGCAGGAAGCATAGGAAAACAGCTTCTAAATATTAAAGAAATGACCGA
AACAGTTGACTGTCTGGACAGTCCCTAATAT

Query= MSMg01no065_k13.g1 MSMg01no065_k13.g1 CHROMAT_FILE:
MSMg01no065_k13.g1 PHD_FILE: MSMg01no065_k13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:14 2005
         (550 letters)



>mm_chr3_112738674_112739624
          Length = 951

 Score = 1019 bits (527), Expect = 0.0
 Identities = 545/551 (98%), Gaps = 1/551 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttttaaaaaatgattaggattcaaaatattgatttggcattcaggaaacaaatcagaaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttaaaaaatgattaggattcaaaatattgatttggcattcaggaaacaaatcagaaat 260

                                                                       
Query: 61  ttattcaccctttggataagagatgaagttaattgagtatttatttattcatcttttcct 120
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtattcaccctttggataagagatgaagttaattgagtatttatttattcatcttttcct 320

                                                                       
Query: 121 tctacaaataaaggaataagagaacagtaattaagtgtcctaaaggtattatgtccaaga 180
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctacaaataaaggaataaaagaacagtaattaagtgtcctaaaggtattatgtccaaga 380

                                                                       
Query: 181 aaaaaagtaccaagcatagcaagtaaatatttaccaggttgtgtaaacagtggtaattgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaaagtaccaagcatagcaagtaaatatttaccaggttgtgtaaacagtggtaattgt 440

                                                                       
Query: 241 ttgtacagaatttattatgcagcacaattctaaatgtgaaccaaagttctaaggctttta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgtacagaatttattatgcagcacaattctaaatgtgaaccaaagttctaaggctttta 500

                                                                       
Query: 301 ttgaaacaaaatattatattcagatttgagtcaaactaatgatgatgtatttgatgtatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgaaacaaaatattatattcagatttgagtcaaactaatgatgatgtatttgatgtatg 560

                                                                       
Query: 361 tatgcgtacgtatatatgtttactcaggtttacaaaaaaaaa-ccatgaaaaaaaaataa 419
           |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 561 tatgcgtacgtatatatgtttactcaagtttacaaaaaaaaaaccatgaaaaaaaaataa 620

                                                                       
Query: 420 gttcttagacttaaagcattttcctaaatgctaaataatttaactgtgagtctgtactta 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gttcttagacttaaagcattttcctaaatgctaaataatttaactgtgagtctgtactta 680

                                                                       
Query: 480 tttggtcctcaaccccaatggagacctttgaagcaataaatattatttgcgtatgcagga 539
           | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 681 tctggtcctcaaccccaatggagacctttgaagcaataaatattatttgtgtatgcagga 740

                      
Query: 540 agcataggaaa 550
           |||||||||||
Sbjct: 741 agcataggaaa 751


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 951
Length adjustment: 10
Effective length of query: 540
Effective length of database: 941
Effective search space:   508140
Effective search space used:   508140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)