Query= MSMg01no066_a12.b1 MSMg01no066_a12.b1 CHROMAT_FILE:
MSMg01no066_a12.b1 PHD_FILE: MSMg01no066_a12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:42 2005
(267 letters)
>mm_chr3_117256913_117257579
Length = 667
Score = 416 bits (215), Expect = e-121
Identities = 251/263 (95%), Gaps = 4/263 (1%)
Strand = Plus / Plus
Query: 7 gaattctctaattacccagaacctcttagcattaactcttgtaagagcttagtatcatgt 66
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctctaaggagccagaacctcttagcattaactcttgtaagagcttagtatcatgt 266
Query: 67 ttagaaacaaaacctagaatgtgagacaatttaaaacagagtaaatattggagtattgtt 126
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ttagaaacaaaacatagaatgtgagacaatttaaaacagagtaaatattggagtattgtt 326
Query: 127 ttactag-gcatgataaaa-aaagaagcagataatgttttttaaccaatgtgagaatttg 184
||||| | |||||| |||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 327 ttact-gtgcatga-aaaacaaagaagtagataatgttttttaaccaatgtgagaatttg 384
Query: 185 cgtagccgctaagatttctaaattcagattacttgagagcaagttttgaattccaagctg 244
|||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 385 tgtagccgctaagatttctaaattcagataatttgagagcaagttttgaattccaagctg 444
Query: 245 gatgttgtaaatagtttctgaag 267
|||||||||||||||||||||||
Sbjct: 445 gatgttgtaaatagtttctgaag 467
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 667
Length adjustment: 9
Effective length of query: 258
Effective length of database: 658
Effective search space: 169764
Effective search space used: 169764
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no066_a12.g1 MSMg01no066_a12.g1 CHROMAT_FILE:
MSMg01no066_a12.g1 PHD_FILE: MSMg01no066_a12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:42 2005
(239 letters)
>mm_chr3_117391473_117392111
Length = 639
Score = 462 bits (239), Expect = e-135
Identities = 239/239 (100%)
Strand = Plus / Minus
Query: 1 cagccattgttctgacgttttctgaaaggtataaattttaaaatagttctaagtagttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cagccattgttctgacgttttctgaaaggtataaattttaaaatagttctaagtagttgc 380
Query: 61 atcatggttaagcactcttggctgagtttggttaattcgcatgcatctttaattttttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 atcatggttaagcactcttggctgagtttggttaattcgcatgcatctttaattttttcc 320
Query: 121 tggactttatcattgtacaaccttgggttcatgatgcttaaatgtaatagcagaagtgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tggactttatcattgtacaaccttgggttcatgatgcttaaatgtaatagcagaagtgat 260
Query: 181 ttaactttgaccctgattagttctttaatttataactcttttaatctgaccaggtttag 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ttaactttgaccctgattagttctttaatttataactcttttaatctgaccaggtttag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
