Query= MSMg01no066_i20.b1 MSMg01no066_i20.b1 CHROMAT_FILE:
MSMg01no066_i20.b1 PHD_FILE: MSMg01no066_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:22 2005
(602 letters)
>mm_chr3_143117899_143118901
Length = 1003
Score = 1131 bits (585), Expect = 0.0
Identities = 594/597 (99%), Gaps = 1/597 (0%)
Strand = Plus / Minus
Query: 5 gaattctacaggcacttccatatttagaggtgttaaatttattttgaataccaaaaactt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gaattctacaggcacttccatatttagaggtgttaaatttattttgaataccaaaaactt 742
Query: 65 aagaccaaagcgcccaagagtgtttgcttttttataagtctttcagcaggtcagacccga 124
|||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aagaccaaagtgcccaagtgtgtttgcttttttataagtctttcagcaggtcagacccga 682
Query: 125 cagctggatgtctcagggtgactaatgaatgcataatataccacatgagaattttaagac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagctggatgtctcagggtgactaatgaatgcataatataccacatgagaattttaagac 622
Query: 185 aatctgtaagaaaa-gggggggggcttcacattttgcctattacacaataaagaaccgat 243
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatctgtaagaaaaggggggggggcttcacattttgcctattacacaataaagaaccgat 562
Query: 244 atctattcccctgactgttgaaagtgctgtgactgactcccagtagttcccagtacagtt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atctattcccctgactgttgaaagtgctgtgactgactcccagtagttcccagtacagtt 502
Query: 304 gtgtgggagttatcagcccacagagccaagttctcacatgctctcagtatgtgtccatgg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgtgggagttatcagcccacagagccaagttctcacatgctctcagtatgtgtccatgg 442
Query: 364 gacaggtctttaaaactttgcatttccctggttaattttcaatcttcagtggacaaacag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacaggtctttaaaactttgcatttccctggttaattttcaatcttcagtggacaaacag 382
Query: 424 gcatacatctgacaacagattgctttctgcccatctctgaaatgcttggcttctatgtaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcatacatctgacaacagattgctttctgcccatctctgaaatgcttggcttctatgtaa 322
Query: 484 ctgggtacaattaaatcctccaagagctgcagttgagttacccagggataacttccttga 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgggtacaattaaatcctccaagagctgcagttgagttacccagggataacttccttga 262
Query: 544 ggttggtcacatgctctctctgcacacagcaaggtacccagctttttatttgttttg 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggttggtcacatgctctctctgcacacagcaaggtacccagctttttatttgttttg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1003
Length adjustment: 10
Effective length of query: 592
Effective length of database: 993
Effective search space: 587856
Effective search space used: 587856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_i20.g1 MSMg01no066_i20.g1 CHROMAT_FILE:
MSMg01no066_i20.g1 PHD_FILE: MSMg01no066_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:23 2005
(183 letters)
>mm_chr3_142983075_142983657
Length = 583
Score = 284 bits (147), Expect = 2e-81
Identities = 162/171 (94%), Gaps = 8/171 (4%)
Strand = Plus / Plus
Query: 20 attcattcatt-------cattcattcattcattcattcaatatgctatttttaagtgcc 72
||||||||||| |||||||||||||||||||||| | |||||||||||||||||
Sbjct: 214 attcattcattttttcctcattcattcattcattcattca-tgtgctatttttaagtgcc 272
Query: 73 tggtaggtgccatgaagtctatgttctaggtatccaggagttgaagataatggactgtat 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tggtaggtgccatgaagtctatgttctaggtatccaggagttgaagataatggactgtat 332
Query: 133 ggagtttatgttctagtgagaaggagagatgacaaacaggatgtttctgta 183
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ggagtttatgttctagtgagaaggagagatgacaaacaggatgtttctgta 383
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 183
Length of database: 583
Length adjustment: 8
Effective length of query: 175
Effective length of database: 575
Effective search space: 100625
Effective search space used: 100625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
