AAAATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTGTACTGAATTCTTCTGGCCATGGGATTTGTTTGTTTGGTTGG
TTGGAAGATCATTAATGACTGCTTCTATTTCACTAGGAGCTATGGATTTC
TTTAAATTATTTATTTCATCTTGATTTAACCTTGGTAAGCTGTATATATC
AAGAAATTTGTCCATTTCTTTCAGGTTTTCCAGTTTAGTAGAATACAGAT
TTTTATTAGATATTTTCTTTATTTACATTTCAAATGTTATCCCCTTTCCT
ATTTTCCCCTCTGAAAATTCCCTATGTCCTCCTCACTCCCCCTGCTCCCC
AACCCATCTTCTTCCATTCCTGGTCCGGGCATTCCCCTGTCCTGAGGCAT
AGAGCCTTCACAGGACCAACTGCCTCTCCTCCCATTGATGACTGACATGG
CCTTCCTCTTCTACATATAGCTAGAGCCACAAGTTCCACCATGTGTTTTC
TTTGATTGGTGGTATAGTTCCAAGGAGTTCTGTGTTCACTGTCTAGTTTT
ATATTATTGTTCCTCCTATGGTGCTTCTGACTCTTTTATTTCCTTGTGTT
ATTCTTCTGACCTCTTCATTGTACTACTTAGTTTTCTTCCTAATGATATG
ATGTTAGTATATATTTTTTGTTTTGTCTTCAATGTTTATTAATTT

NNCCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAGCTTTCTTCACTGAGCCTTAAGTG
CTATGTGTCAGTATTTAAATACCTCCTTTCCGGTACCGTGTGCTCTTTCC
CCTCTTGATTTCTACGTCTCCAGAACAAGCAAAGGGCACGTATGAGGCAC
AGAGGATGCTGCTGAGACATTCGGAAGAGCAAAGCAGCTGCTGAGATTCT
TTATAGTTGGTCCTAAATCTTAAATAGTTGAGAATGGTTTTCACTAGCAA
AGTACTGTTGTACCTGCTAGAACACATTTCAAACTTCCGTTCTAGAAAAG
CCAAGAGTGCGGGACTTCTTTGGAATACCTGCTTGGTTTGGACGCTGCCA
GCTAGGTGACTTGACGCTGGTGGATCCTACAGGCTTGAAAGCAGCAGCGG
AGCGGAGGCCAGCCACCGCGGGCCTGCTGGAACCTGGGCTCTCGGGGCCC
TCAGACGCGCTCAGAGGTGAAGCTCCAGATGATGCCGGTTGCTGAGAAGG
CTCCTGGGTGCTACTGTAAGGAAGGAAGGGAACAGCTGTGGTGAGGGGGA
TCAATCTAGTTCAGCCATGAGCCTTGCTTCTCCAAATCCATTAAAGCTTT
AAGGAATACAAGATACCGGTGAACTTTTATTTTTTAAAAAAG

Query= MSMg01no066_n09.g1 MSMg01no066_n09.g1 CHROMAT_FILE:
MSMg01no066_n09.g1 PHD_FILE: MSMg01no066_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:46 2005
         (570 letters)



>mm_chr3_141940278_141941247
          Length = 970

 Score = 1064 bits (550), Expect = 0.0
 Identities = 565/570 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   agctttcttcactgagccttaagtgctatgtgtcagtatttaaatacctcctttccggta 60
           ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 agctttcttcactgagcctgaagtgctatgtgtcagtatttaaatacctcctttccagta 260

                                                                       
Query: 61  ccgtgtgctctttcccctcttgatttctacgtctccagaacaagcaaagggcacgtatga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccgtgtgctctttcccctcttgatttctacgtctccagaacaagcaaagggcacgtatga 320

                                                                       
Query: 121 ggcacagaggatgctgctgagacattcggaagagcaaagcagctgctgagattctttata 180
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcacacaggatgctgctgagacattcggaagagcaaagcagctgctgagattctttata 380

                                                                       
Query: 181 gttggtcctaaatcttaaatagttgagaatggttttcactagcaaagtactgttgtacct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttggtcctaaatcttaaatagttgagaatggttttcactagcaaagtactgttgtacct 440

                                                                       
Query: 241 gctagaacacatttcaaacttccgttctagaaaagccaagagtgcgggacttctttggaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctagaacacatttcaaacttccgttctagaaaagccaagagtgcgggacttctttggaa 500

                                                                       
Query: 301 tacctgcttggtttggacgctgccagctaggtgacttgacgctggtggatcctacaggct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacctgcttggtttggacgctgccagctaggtgacttgacgctggtggatcctacaggct 560

                                                                       
Query: 361 tgaaagcagcagcggagcggaggccagccaccgcgggcctgctggaacctgggctctcgg 420
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 561 tgaaagcagcagcggagcggaggccagccaccgagggcctgctggaacctgggctctcgg 620

                                                                       
Query: 421 ggccctcagacgcgctcagaggtgaagctccagatgatgccggttgctgagaaggctcct 480
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 621 ggccctcagacgcgctcagaggtgaagctccagatgacgccggttgctgagaaggctcct 680

                                                                       
Query: 481 gggtgctactgtaaggaaggaagggaacagctgtggtgagggggatcaatctagttcagc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gggtgctactgtaaggaaggaagggaacagctgtggtgagggggatcaatctagttcagc 740

                                         
Query: 541 catgagccttgcttctccaaatccattaaa 570
           ||||||||||||||||||||||||||||||
Sbjct: 741 catgagccttgcttctccaaatccattaaa 770


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space:   537600
Effective search space used:   537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)