Query= MSMg01no066_o08.b1 MSMg01no066_o08.b1 CHROMAT_FILE:
MSMg01no066_o08.b1 PHD_FILE: MSMg01no066_o08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:50 2005
(303 letters)
>mm_chr3_26048272_26048974
Length = 703
Score = 540 bits (279), Expect = e-158
Identities = 291/295 (98%)
Strand = Plus / Minus
Query: 9 gaattctttttatagcagtcaatataatctcttctgtgcctattcccattgcatgtaaga 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gaattctttttatagcagtcaatataatctcttctgtgcctattcccattgcatgtaaga 444
Query: 69 gagaaattctactcaatggaaggacactttactgctgccattactgcagagtttatagtt 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gagaaattctactcaatggaaggacactttactgctgccattactgcagagtttatagtt 384
Query: 129 gaggaatgtgtcatcatgtgagattcagctgtaatgcctcttttgtgcgaaaccttatgg 188
|||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 383 gagggatgtgtcagcatgtgagattcagctgtaatgcctcttttgtgtgaaaccttacgg 324
Query: 189 gccttgcaggcactctctcattctgacactcataaaacgttcaactctccgtatttatta 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gccttgcaggcactctctcattctgacactcataaaacgttcaactctccgtatttatta 264
Query: 249 tttaattttctccctatgtatagccatgaagcacttcagtgtatggacgtgcagc 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tttaattttctccctatgtatagccatgaagcacttcagtgtatggacgtgcagc 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 703
Length adjustment: 9
Effective length of query: 294
Effective length of database: 694
Effective search space: 204036
Effective search space used: 204036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_o08.g1 MSMg01no066_o08.g1 CHROMAT_FILE:
MSMg01no066_o08.g1 PHD_FILE: MSMg01no066_o08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:51 2005
(113 letters)
>mm_chr3_25906146_25906660
Length = 515
Score = 199 bits (103), Expect = 4e-56
Identities = 112/115 (97%), Gaps = 2/115 (1%)
Strand = Plus / Plus
Query: 1 attctcacttctcttctcagctaatagatactaccttgtgctgaaaagacatgttctttc 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctcatttctcttctcagctaatagatactaccttgtgctgaaaagacatgttctttc 260
Query: 61 ttcctgtctcccttttttaaac-ttcctttggaaaaaa-tcctggtaaactttag 113
|||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 261 ttcctgtctcccttttttaaaccttcctttggaaaaaaatcctggtaaactttag 315
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 113
Length of database: 515
Length adjustment: 8
Effective length of query: 105
Effective length of database: 507
Effective search space: 53235
Effective search space used: 53235
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
