Query= MSMg01no067_c23.b1 MSMg01no067_c23.b1 CHROMAT_FILE:
MSMg01no067_c23.b1 PHD_FILE: MSMg01no067_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:13 2005
(291 letters)
>mm_chr3_83411504_83412191
Length = 688
Score = 505 bits (261), Expect = e-147
Identities = 281/289 (97%), Gaps = 3/289 (1%)
Strand = Plus / Minus
Query: 1 acacacacacacacacacacaccaatctgagggtggcaaaaataaagctgacagggaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 508 acacacacacacacacacacaccaatctgagggtggcaaaaataaagctgagagggaatt 449
Query: 61 gagagacacaatgacagcctcattgaggaatctttgaaaaagattagtgtggtggttgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gagagacacaatgacagcctcattgaggaatctttgaaaaagattagtgtggtggttgtt 389
Query: 121 gtctttctttttttttttcaggatttgtttaaatctattgtgttaaaaaaatatgactta 180
||||||| ||||||||||||||||||||||||||||||||||||||||||| | || |
Sbjct: 388 gtctttc---ttttttttcaggatttgtttaaatctattgtgttaaaaaaatagggctca 332
Query: 181 caattccttgctgaagtgaagactcaggcaacacttttacatttaaccgacctctcaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 caattccttgctgaagtgaagactcaggcaacacttttacatttaaccgacctctcaagt 272
Query: 241 ccttgcagaatatcactagccttgcattattaccactgtgtctccttct 289
|||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 271 ccttgcagaataacactagccttgcattattaccactgtgtctccttct 223
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 688
Length adjustment: 9
Effective length of query: 282
Effective length of database: 679
Effective search space: 191478
Effective search space used: 191478
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no067_c23.g1 MSMg01no067_c23.g1 CHROMAT_FILE:
MSMg01no067_c23.g1 PHD_FILE: MSMg01no067_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:13 2005
(239 letters)
>mm_chr3_83240397_83241036
Length = 640
Score = 426 bits (220), Expect = e-124
Identities = 233/242 (96%), Gaps = 9/242 (3%)
Strand = Plus / Plus
Query: 1 agcagagctttaggcgatcttatgggctcaggacacataagttatagtggagatgccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcagagctttaggcgatcttatgggctcaggacacataagttatagtggagatgccaaa 260
Query: 61 acatctaggacttcagagaccaagatcttggagataggaaatccaaataaataagcccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acatctaggacttcagagaccaagatcttggagataggaaatccaaataaataagcccag 320
Query: 121 catttagtggttttcccctcagaggaatttcccaaatattaatatgttcagacaaggact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catttagtggttttcccctcagaggaatttcccaaatattaatatgttcagacaaggact 380
Query: 181 ctgtaaccaagtaacttttttttt-----cagagcagtatttctagaagtctccgaaggg 235
|||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 ctgtaaccaagtaacttttt----aaaaacagagcagtatttctagaagtctccgaaggg 436
Query: 236 ag 237
||
Sbjct: 437 ag 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 640
Length adjustment: 9
Effective length of query: 230
Effective length of database: 631
Effective search space: 145130
Effective search space used: 145130
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
