Query= MSMg01no068_k19.b1 MSMg01no068_k19.b1 CHROMAT_FILE:
MSMg01no068_k19.b1 PHD_FILE: MSMg01no068_k19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:11 2005
(318 letters)
>mm_chr3_35147178_35147895
Length = 718
Score = 607 bits (314), Expect = e-178
Identities = 314/314 (100%)
Strand = Plus / Plus
Query: 4 ggaattctcactaaaacctacaaaatgcaaggataatgggacagagagcaaaaaagggtt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcactaaaacctacaaaatgcaaggataatgggacagagagcaaaaaagggtt 263
Query: 64 agctgtaaagttattagaaacaaatgccctctggatttgaatcttgtctctgtcacttcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agctgtaaagttattagaaacaaatgccctctggatttgaatcttgtctctgtcacttcc 323
Query: 124 agatcggtgacctaagttaatgttaatatctctgatccttggttttcttatatgagaaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agatcggtgacctaagttaatgttaatatctctgatccttggttttcttatatgagaaaa 383
Query: 184 accttggactattttgaggattctattgactgacagattacaaactcctaataaatggca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 accttggactattttgaggattctattgactgacagattacaaactcctaataaatggca 443
Query: 244 gctaatagtaatatggagtcttgattgaaatggaagtacttggtactatccttcttgggc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gctaatagtaatatggagtcttgattgaaatggaagtacttggtactatccttcttgggc 503
Query: 304 ctacagggtttgta 317
||||||||||||||
Sbjct: 504 ctacagggtttgta 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no068_k19.g1 MSMg01no068_k19.g1 CHROMAT_FILE:
MSMg01no068_k19.g1 PHD_FILE: MSMg01no068_k19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:11 2005
(212 letters)
>mm_chr3_35270924_35271536
Length = 613
Score = 397 bits (205), Expect = e-115
Identities = 211/213 (99%), Gaps = 1/213 (0%)
Strand = Plus / Minus
Query: 1 tgcagacagaagaaatgcttggcaatttgtactttggtttaagcctgacatgctcatcct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 413 tgcagacagaagaaatgcttggcaatttgtactttggtttaagcctgacatgttcatcct 354
Query: 61 ggcatttattttaagctga-tttttttagttagaaacctattaccaggtctctcgtcaaa 119
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ggcatttattttaagctgattttttttagttagaaacctattaccaggtctctcgtcaaa 294
Query: 120 gagtgagaagactgtggactaagcccagctactgctgattggagtaaatacacttattgg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gagtgagaagactgtggactaagcccagctactgctgattggagtaaatacacttattgg 234
Query: 180 agtgaaagtgcctcccatggggttttctccata 212
|||||||||||||||||||||||||||||||||
Sbjct: 233 agtgaaagtgcctcccatggggttttctccata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 212
Length of database: 613
Length adjustment: 9
Effective length of query: 203
Effective length of database: 604
Effective search space: 122612
Effective search space used: 122612
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
