TGCGGCCGCTAAACGACTCCTATAGTTCCAGAATCCGCGGAATTCTTTGT
TTATTTCTCGAGCCCATTATTAATGGGGTTATGTGATTTTCTGGAGTCCA
CCTTCTTGGATTCTTAATATATTGGATATTAGTCCTCTATCTGATTTAGG
ATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCTTTTTGTCTTATTGA
TGTTCTCTTTTGCCTTAAAGAAGCTTTGCAGTTTCATGAGGTCCCATTTG
TCAATTCTTGATCTTACAGCACAAGCCATTGCTGTTATATTCAGGAATTT
TTCCCCTGTGCCAATATATTTGAGGGTTTTCCCCACTTTATATGTTTCAG
TGTCTCTCGTTTTATGTGGAGCTCCTTGATCCACTTAGATTTTACCTTAG
TACAAGGAGATAGGAATGGATCAATTCACATTCTTCTACATGTTAACCAC
CAGTTGTGCCAGAACCATTTGTTGAAAATGCTGTCCTTTTTTCACAAGAT
GGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATCAGTGTGTGGGTTCA
TTTCTGGGTCTTCAATTCTATTCCATTGGTCTAATTTTCTGTAGCTATAC
AAGTACCATGCACTTTTTATCACAATTGCTCTGTAGTAAAGCATTACGTC
AGGCATGTTGATTCCTCCAGAAGGTATTTTATCCTTTGAGAAAGTTTTTG
CTATCC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXACTTTGGCTCATAGTTGAATGTGGAATA
TCAAGATGTTGAAAAGGCATGGCTAAAGAGCCATCTCCTGCCTGTGGCAC
TGAGATGCTGCCTAGTCATGACTCAATGAATCCAGAGACAGAAAAATGGG
GACATCTTACACTTGACTGATTTTATATTCAGTTTAAATTTCTATATCAT
GGGATCACCAGTGACAATCCCTTTCAAGTCTGTCTTTATACCTCAGTGAA
CATTTCCTGAAGAAACAATCAAAGGGATATGCAAAAAGGTGCTTCCTTAA
TGTTGAAGGTATTTTGCAATCCAATCAGTCTACAATCTACATTGAGCATT
GCAAACTGATCTCACAAGACTGGGAAAGATATTCGAATGTGAGCGTTTGA
TAGGGAGCAGGAGATTAAACTATGCATTGAAGAGCATACAATGATGTACA
ATTAACATTAATGACCATTCGAGGCATCATATGTAGAAGCTCCAAAATAT
ATACAAAGACAAAAAAATTCTAATGAGAAGAATTTCTCAAAATTGGGATT
TCTTTAATTTTTAAATATGCTTTGTGTAGCCTGAGTCATTAATAAGAATA
TTTTTACTGAAGGACTAGACACATCTTTTCCCACTGAGCCCAGACAAGGC
AGACGAGTTAGGGGA

Query= MSMg01no068_l17.g1 MSMg01no068_l17.g1 CHROMAT_FILE:
MSMg01no068_l17.g1 PHD_FILE: MSMg01no068_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:16 2005
         (555 letters)



>mm_chr3_71253041_71253996
          Length = 956

 Score =  990 bits (512), Expect = 0.0
 Identities = 545/556 (98%), Gaps = 1/556 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   actttggctcatagttgaatgtggaatatcaagatgttgaaaaggcatggctaaagagcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 actttggctcatagttgaatgtggaatatcaagatgttgaaaaggcatggctaaagagcc 697

                                                                       
Query: 61  atctcctgcctgtggcactgagatgctgcctagtcatgactcaatgaatccagagacaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 696 atctcctgcctgtggcactgagatgctgcctagtcatgactcaatgaatccagagacagg 637

                                                                       
Query: 121 aaaatggggacatcttacacttgactgattttatattcagtttaaatttctatatcatgg 180
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 aaaatggggacatcttatacttgactgattttatattcagtttaaatttctatatcatgg 577

                                                                       
Query: 181 gatcaccagtgacaatccctttcaagtctgtctttatacctcagtgaacatttcctgaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gatcaccagtgacaatccctttcaagtctgtctttatacctcagtgaacatttcctgaag 517

                                                                       
Query: 241 aaacaatcaaagggatatgcaaaaaggtgcttccttaatgttgaaggtattttgcaatcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 aaacaatcaaagggatatgcaaaaaggtgcttccttaatgttgaaggtattttgcaatcc 457

                                                                       
Query: 301 aatcagtctacaatctacattgagcattgcaaactgatctcacaagactgggaaagatat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 456 aatcagtctacaatctacattgagcattgcaaactgatctcacaagactgggaaagagat 397

                                                                       
Query: 361 tcgaatgtgagcgtttgatagggagcaggagattaaactatgcattgaagagcatacaat 420
           |||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 396 tcgaatgtgagcatttgatagggagcaggagattaaactatgcattaaagagtatacaat 337

                                                                       
Query: 421 gatgtacaattaacattaatgaccattcgaggcatcatatgtagaagctccaaaatatat 480
           ||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 336 gatgtacaattaatattaacgatcattcgaggcatcatatgtagaagctccaaaatatat 277

                                                                       
Query: 481 acaaagacaaa-aaaattctaatgagaagaatttctcaaaattgggatttctttaatttt 539
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 276 acaaagacaaagaaaattctaatgagaagaatttctcaaaattgggatttcttgaatttt 217

                           
Query: 540 taaatatgctttgtgt 555
           ||||||||||||||||
Sbjct: 216 taaatatgctttgtgt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 956
Length adjustment: 10
Effective length of query: 545
Effective length of database: 946
Effective search space:   515570
Effective search space used:   515570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)