CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACAAAGAATGGTGAACAGTCTTTCTTTAAAATCTCTTCATTTCTGC
CAGGATGGTTACTAGATCAAGGAAGTACAGCAGAGATCAAGCCAATTTCA
GAATATAAGCCATTGATACCGTTGGATTGCTGCACAATAATATTGTGCTG
ACCATTGTACTATTAATATCAGGATTATGTATGGCTATGAGGTCATTTGA
CTTTATCATTAAATAATGTTGGATATGTTGCTAATATTATTCTTTGAGTT
CCCTTATTTTGCAAGGGAGGTATACAGAAATTTGGGACACTGTTGTGGGG
ATGACAGGCTTCAGATATAATATTTATAAAACACACAAAATATGTGACAT
TTAATGTAAAATGTAATATATTTTGTTACATTAAGATTCCACATAACCTA
ACACAGAATGATAATTCTTATGCAAACAGAAGTTATTTTCTCTCCCTGTC
TAAAGCATAAAGAGAATGAGTAATTAACAGTTTATCTAGGAATAACATCT
GTGGAGTTCTGAATCTGACCTATATCTGATAAGTAACTGAATCACTCACA
GTAGCTCTCAGAAGTTAATATGCTTGGCACCTTACTAATGCTATAATTTA
TTATAGAAGAAATTAATTTGAATTACTGCNAAAATTTAGAAGGATAAGAC
ATTTGAAATCTTTAAACATAAGTTN

GCGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTAAGAAAAAAAGTGGAGATGGAGA
AAAGAAAGATATGACTTGATTGGATTGACTATCTCCTCTGACATAAACAT
GAAGACACACTCTCATTTCTTAGTGATCTAGTCATTAGACAACATTAGAA
TATCAGAAAAATTGTACATATTGATGTTCCTCCTGTGGGGCTGTAAGCCC
CTTGAGCTCCTGAGTCCTTTCTCTAGCTTGGGTACTTTCTGAGCACATTG
GGGACAATGTGCTCAGTCCAGAGGATGGTTGTGAGCGTCCACTTCTGTAT
TTGTCAGGCCAGAGCTCTTTTTTTACTACCCCACCAACCAAAGAATACAC
ATGGTGAGACTCATGGCTCCAGCTGCATATGTAACAGAGGATGGCCTAGT
CAGTCATCAATGGGAGGAGAGGCCCTTGTTCCTGTGAAAGCTCTAAGCCC
CAGAGTAGGGGAATGCCAGGGCCAGGAAGCAGGAGAGGGTTGGTTGGTGA
GCAGGGGGAAGGGGGAGGGGGGAGTTTCCTTTTTCCCTTTGCCCCCGTTT
CTTTCTTTCCTTTCGCTTTCCTTTTTTTTTTCTTTTTTTTTTCTCTCTCC
GTCTCCCCTTCCGGTTCTCCCTTCTGTCCTTTCCCTCCCCCGTCTTTTTC
CCTTCCCCCCTTTGCTTTTCTTTG

Query= MSMg01no068_m21.b1 MSMg01no068_m21.b1 CHROMAT_FILE:
MSMg01no068_m21.b1 PHD_FILE: MSMg01no068_m21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:21 2005
         (321 letters)



>mm_chr3_76616370_76617090
          Length = 721

 Score =  509 bits (263), Expect = e-148
 Identities = 302/315 (95%)
 Strand = Plus / Minus

                                                                       
Query: 7   attcacaaagaatggtgaacagtctttctttaaaatctcttcatttctgccaggatggtt 66
           ||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||
Sbjct: 521 attcacaaagaatggtgcagagtctttctttaaaatttcttcatttctgccaggatggtt 462

                                                                       
Query: 67  actagatcaaggaagtacagcagagatcaagccaatttcagaatataagccattgatacc 126
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 461 accagatcaaggaagtacagcagagatcaagccaatttcagaatataagccattgatact 402

                                                                       
Query: 127 gttggattgctgcacaataatattgtgctgaccattgtactattaatatcaggattatgt 186
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 401 gttggattgctgcacaataatattgtgctgaccattgtactattaatatcaggattctgt 342

                                                                       
Query: 187 atggctatgaggtcatttgactttatcattaaataatgttggatatgttgctaatattat 246
           |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 341 atggctatgaggccatttgactttatcattaaataatgttggatatgttgcttatattat 282

                                                                       
Query: 247 tctttgagttcccttattttgcaagggaggtatacagaaatttgggacactgttgtgggg 306
           ||| |||||||||||| |||||||||||||| ||||| | ||||||||||||||||||||
Sbjct: 281 tctgtgagttcccttagtttgcaagggaggtgtacaggattttgggacactgttgtgggg 222

                          
Query: 307 atgacaggcttcaga 321
           |||||||||||||||
Sbjct: 221 atgacaggcttcaga 207


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space:   222144
Effective search space used:   222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no068_m21.g1 MSMg01no068_m21.g1 CHROMAT_FILE:
MSMg01no068_m21.g1 PHD_FILE: MSMg01no068_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:22 2005
         (291 letters)



>mm_chr3_76554826_76555516
          Length = 691

 Score =  563 bits (291), Expect = e-165
 Identities = 291/291 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   taagaaaaaaagtggagatggagaaaagaaagatatgacttgattggattgactatctcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taagaaaaaaagtggagatggagaaaagaaagatatgacttgattggattgactatctcc 260

                                                                       
Query: 61  tctgacataaacatgaagacacactctcatttcttagtgatctagtcattagacaacatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctgacataaacatgaagacacactctcatttcttagtgatctagtcattagacaacatt 320

                                                                       
Query: 121 agaatatcagaaaaattgtacatattgatgttcctcctgtggggctgtaagccccttgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaatatcagaaaaattgtacatattgatgttcctcctgtggggctgtaagccccttgag 380

                                                                       
Query: 181 ctcctgagtcctttctctagcttgggtactttctgagcacattggggacaatgtgctcag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcctgagtcctttctctagcttgggtactttctgagcacattggggacaatgtgctcag 440

                                                              
Query: 241 tccagaggatggttgtgagcgtccacttctgtatttgtcaggccagagctc 291
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tccagaggatggttgtgagcgtccacttctgtatttgtcaggccagagctc 491


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space:   192324
Effective search space used:   192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)