CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTAGCAACTTACGGGTGAAATAGACATGAGTCCCTATTCCTAACCA
AGAAAGTATCTCCAATTGGCAACTACTCACAAAGAAGAAATTAGTTTCTC
CTACTGTTTGACTGGGCAAGCAAACCATACTTAAGGGAAAGCCTATGTCA
CAATAAAACAAATAAAAAGGTCGATTGATTGATTGAATGATTGATTGATT
GAGGCTCATAATGCTTTGTCCTCCCCACCCCCAGCTTATTTATCTTTGTA
TTTTGTTTTCTTATTGATTATGATTTCTACATGAGACAGAGAAATGGGGC
AGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGTGTCTG
TGTCTGTGTCTGTGTGCCCGCGTGTCTCTGTGTGTATCTGCATATGTGTC
CATGTTTGTGTATAGATGCATGTTTCTTGCTCTCTTTCATTTATTTGGTT
TGCTTCATTTTTTTTATTCTTGTTTATTTTTTATTGGCCTATTTGCTTCC
TAAAAAGAGGATAAAAGTCCTGATGCTGGAATGAAAGATAACTAAAAGAT
CTGCGCAAAGATCCTATATAGAAAACCATGATCTAGACTACATTGGCAGA
TAAGTAATTTCAATTCTGCAATGAAAACACTGGGGGGCGTTTTGTAATTT
CACATAATCTTTCTTTTTTTG

CCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCATGCCAATTCAACCTAAGCCAGC
AGTGATTGGGTGACTGTCCCCAGAATCACTCATATTTAGTGTCTGAGCAA
AGCTATTGGGTACTGGTAATTGTAGGCTGTTGGGTTGATGGCAGTTATTC
TTAATGAATGACCCAAATCGGCAAGACTTCAAGGTCATGGGTCACTGGAA
TCTGTTGCCTGGTTTCTGTGGACAGCTGCTCACTTGGGGAGGGGAGGGGA
TATCCCTCACACTGACAGGGTGTGTGTGCAAGGGAGAGAGAGAAAGAAAT
AGAGACCCATGATATCAAGGGCAGGAGCTTTTTGCTTATGAGTGAGCTGC
GGACCAAGACATGTCCTATATCCTTATATCTTCATGGAGGGGTTGTATGT
AAAGGAAAGAAATAGTTTTTTAACTGTATATTCTTTAACTTGTAAAAATA
ATGTTCAAAAAGCAAGAAGACGGAGAACCCCTTTCTTAGCTGTTCATGTA
AACTCTGAGTGGCGTTGGTGCTTGCACACGCTACACTTCCGTCATGTTCT
TTGAGACGGGTTCCTGACTGTCTGCTGGCAGTGATGTTTTGAGGTGGAAT
CTATGCTGGGCTTCAGGGGGCCCCTGCCTATCCCAGATCTCCACCTCTTG
CCTCGGTGCN

Query= MSMg01no068_o12.g1 MSMg01no068_o12.g1 CHROMAT_FILE:
MSMg01no068_o12.g1 PHD_FILE: MSMg01no068_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:15:30 2005
         (604 letters)



>mm_chr3_18526365_18527367
          Length = 1003

 Score = 1114 bits (576), Expect = 0.0
 Identities = 597/604 (98%), Gaps = 1/604 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   catgccaattcaacctaagccagcagtgattgggtgactgtccccagaatcactcatatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 catgccaattcaacctaagccagcagtgattgggtgactgtccccagaatcactcatatt 744

                                                                       
Query: 61  tagtgtctgagcaaagctattgggtactggtaattgtaggctgttgggttgatggcagtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tagtgtctgagcaaagctattgggtactggtaattgtaggctgttgggttgatggcagtt 684

                                                                       
Query: 121 attcttaatgaatgacccaaatcggcaagacttcaaggtcatgggtcactggaatctgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 attcttaatgaatgacccaaatcggcaagacttcaaggtcatgggtcactggaatctgtt 624

                                                                       
Query: 181 gcctggtttctgtggacagctgctcacttggggaggggaggggatatccctcacactgac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gcctggtttctgtggacagctgctcacttggggaggggaggggatatccctcacactgac 564

                                                                       
Query: 241 agggtgtgtgtgcaagggagagagagaaagaaatagagacccatgatatcaagggcagga 300
           ||||||||||||||||||||||||| ||||||||||||||| |||| | |||||||||||
Sbjct: 563 agggtgtgtgtgcaagggagagaga-aaagaaatagagacctatgagagcaagggcagga 505

                                                                       
Query: 301 gctttttgcttatgagtgagctgcggaccaagacatgtcctatatccttatatcttcatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gctttttgcttatgagtgagctgcggaccaagacatgtcctatatccttatatcttcatg 445

                                                                       
Query: 361 gaggggttgtatgtaaaggaaagaaatagttttttaactgtatattctttaacttgtaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gaggggttgtatgtaaaggaaagaaatagttttttaactgtatattctttaacttgtaaa 385

                                                                       
Query: 421 aataatgttcaaaaagcaagaagacggagaacccctttcttagctgttcatgtaaactct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aataatgttcaaaaagcaagaagacggagaacccctttcttagctgttcatgtaaactct 325

                                                                       
Query: 481 gagtggcgttggtgcttgcacacgctacacttccgtcatgttctttgagacgggttcctg 540
           |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 324 gagtggtgttggtgcttgcacaccctacacttccgtcatgttctttgagacgggttcctg 265

                                                                       
Query: 541 actgtctgctggcagtgatgttttgaggtggaatctatgctgggcttcagggggcccctg 600
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 264 actgtctgctggcagtgatgctttgaggtggaatctatgctgggcttcagggggcccctg 205

               
Query: 601 ccta 604
           ||||
Sbjct: 204 ccta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1003
Length adjustment: 10
Effective length of query: 594
Effective length of database: 993
Effective search space:   589842
Effective search space used:   589842
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)