Query= MSMg01no069_k13.b1 MSMg01no069_k13.b1 CHROMAT_FILE:
MSMg01no069_k13.b1 PHD_FILE: MSMg01no069_k13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:16:28 2005
(246 letters)
>mm_chr3_112275334_112275980
Length = 647
Score = 455 bits (235), Expect = e-132
Identities = 244/247 (98%), Gaps = 1/247 (0%)
Strand = Plus / Plus
Query: 1 aacctttgagac-cttataccacgaacagatttatctttaggaagttcaccacctcctta 59
|||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 201 aacctttgagacacttataccacgaacagatttatctttaggaagttcaccacattctta 260
Query: 60 tgccaaaatcactataaatcccctctagagactggcacaggaataataaatgtttgaatt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgccaaaatcactataaatcccctctagagactggcacaggaataataaatgtttgaatt 320
Query: 120 tcaaaaattgatgaatggtttccaagagagtagcctacatatcaactaaaaatgagatgt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaaaaattgatgaatggtttccaagagagtagcctacatatcaactaaaaatgagatgt 380
Query: 180 tagaactctgcaagatttgcaggcagaattattgctcaggtctaacccactagtgtcctc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagaactctgcaagatttgcaggcagaattattgctcaggtctaacccactagtgtcctc 440
Query: 240 tcttcaa 246
|||||||
Sbjct: 441 tcttcaa 447
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 647
Length adjustment: 9
Effective length of query: 237
Effective length of database: 638
Effective search space: 151206
Effective search space used: 151206
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no069_k13.g1 MSMg01no069_k13.g1 CHROMAT_FILE:
MSMg01no069_k13.g1 PHD_FILE: MSMg01no069_k13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:16:28 2005
(178 letters)
>mm_chr3_112446131_112446708
Length = 578
Score = 329 bits (170), Expect = 7e-95
Identities = 176/178 (98%)
Strand = Plus / Minus
Query: 1 tgtgaagatataattgtagtcaagataaaagaaggaaaggagaaattgttttatttcttc 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tgtgaagacataattgtagtcaagataaaagaaggaaaggagaaattgttttatttcttc 319
Query: 61 agtaacactgaaggttcaaagagaatcagaacctataagtcctgcattctatcttggcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 agtaacactgaaggttcaaagagaatcagaacctataagtcctgcattctatcttggcag 259
Query: 121 aaccaatgaactattctttgtgatgtgacggttatcattgcatactctacttggcata 178
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 258 aaccaatgaactattctttgtgatgtgacagttatcattgcatactctacttggcata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 178
Length of database: 578
Length adjustment: 8
Effective length of query: 170
Effective length of database: 570
Effective search space: 96900
Effective search space used: 96900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
