Query= MSMg01no070_h11.b1 MSMg01no070_h11.b1 CHROMAT_FILE:
MSMg01no070_h11.b1 PHD_FILE: MSMg01no070_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:33 2005
(182 letters)
>mm_chr3_137140990_137141571
Length = 582
Score = 315 bits (163), Expect = 8e-91
Identities = 177/187 (94%), Gaps = 10/187 (5%)
Strand = Plus / Minus
Query: 1 attttattgctgttgtgttatcttatgtgcaatgaaaatataatcaaatagattaatgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 attttattgctgttgtgttatcttatgtgcaatgaaaatataatcaaatagattaatgaa 323
Query: 61 cattaacacacacatgtataaacagacagtatggataatgtaggaaatgcttcaaggttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cattaacacacacatgtataaacagacagtatggataatgtaggaaatgcttcaaggttt 263
Query: 121 tt-----atttttagtttttaaaacttatatattgctaccactgcttaaataataatttc 175
|| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttaggaca-----agtttttaaaacttatatattgctaccactgcttaaataataatttc 208
Query: 176 aactaaa 182
|||||||
Sbjct: 207 aactaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 182
Length of database: 582
Length adjustment: 8
Effective length of query: 174
Effective length of database: 574
Effective search space: 99876
Effective search space used: 99876
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no070_h11.g1 MSMg01no070_h11.g1 CHROMAT_FILE:
MSMg01no070_h11.g1 PHD_FILE: MSMg01no070_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:33 2005
(271 letters)
>mm_chr3_137025329_137025999
Length = 671
Score = 516 bits (267), Expect = e-151
Identities = 270/271 (99%)
Strand = Plus / Plus
Query: 1 ctatctattgatttttctcctatgtatatctctgttactatgccaagaaagtaaatttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctatctattgatttttctcctatgtatatctctgttactatgccaagaaagtaaatttaa 260
Query: 61 ttgttataaaataaattagtcttaaaaattaacaaaaatcaatgagtaaatattccctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgttataaaataaattagtcttaaaaattaacaaaaatcaatgagtaaatattccctgg 320
Query: 121 aatacccacctggccttaattaagatctggaaaacattacgaaatactttgcccagtgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatacccacctggccttaattaagatctggaaaacattacgaaatactttgcccagtgct 380
Query: 181 ggagatccccagattggggtgtagcttgcagctgtaccaaagtgttcgagtctatttcct 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 ggagatccccagattggggtgtagcttgcagctgtaccaaagcgttcgagtctatttcct 440
Query: 241 ctgatgactttctaatctataaggaactcac 271
|||||||||||||||||||||||||||||||
Sbjct: 441 ctgatgactttctaatctataaggaactcac 471
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 671
Length adjustment: 9
Effective length of query: 262
Effective length of database: 662
Effective search space: 173444
Effective search space used: 173444
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
