AATATTGCGGCGCTATACGACTCCTATAGGTTCAGAAACGCGGAATTCAC
TAGCTGGCTGCCTAGTGAGCTTCAATGATATACTCATCTCTACCTTCTCA
GCACTTGAACTCAGATCTGTCCCACCGTGCCTACTTGTTTTTATTGTTTT
TGTTGTTGTTGTTTTGTTTTTAAACATGAGTTTAGAGATTAAACTCAGGT
TGAACTCAGGTCATGCTTACAAGGCAAGCCTTTACCAACTGAGCTTTTAG
GCAATTTTTTATTATATTTTTTCCTATATATTTTTGAAGTTGACCTTTGC
CTATAGATTGATTTGCTCCAATGGCTCTGACTGGTCTTTACCTTTTCTTC
AGCTTTCTTTTTTGTCTCAGCATCCATCCAAGTAAGGTCATCCAAAGTCT
GAATAAAAACTTCCCGGATTTGTGCAATCAAGTCTTCAACCTCAAAACAA
AAGGTTATTAATAGTCTAATATAGTCCATGAGTTCTTTCTTCATTACAGG
TTTTAAAACGAAGGTGCATGCTGCCCTTGTAGATGCAACAGTAAGCTAAG
AAATATAAATTTACAGATGAATTCTGACCTCCCTGCACAATGGATGTAAA
TGGGCATATAGGATCAGTGTGCTTTATAGCAATATTGTTGTTATCGAAAT
TTGTCAGTTAAATACATCGTATTACATACAGAAAGCCGAAGTTATCTTCA

CATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCTTAATCCATTTAGATTTGACCTTAGTA
CAAGGAGATGGGAATGGATAAATTCGCATTCTTCTACATAGTAACCACCA
GTTGTGCCAGCACCATTTGTTGAAAATGCTGTCTTTTTTCCACTGGATAG
TTTTAGCTCCCTTGTCAAAGATCAAGTGACCATAGGTGTGTGGGTTCATT
TCTGGGTCTTCAATTCTATTCCATTGGTCTCCTTGTCTGTCCCTATACCA
GTACCATGCAATTTTATCACAATTGCTCTGTAGTGCAGCTTTAGGTCAGG
CATGGTGATTCCACCAGAGGTTTTTTTATTCTTGAGAAGAGGTTTTACTA
TCCTAGGTTTTTTGTTATTTCAGATGAATTTGCAGATTGTCCTTTCTAAT
TTGTTGAAGAATTGATTTGGAATTTTGATGGTGATTGCATTGAATCTGTA
TATTGCTTTTGGCAAGATAGCCATTTTTACTATGTTGATCCTGCCAATCC
CTGATCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTAATTTCTTTC
TTCATAGACTTGAAGTTCTTATCATACCGACCTTTCACTTCCTTAGTTAG
AGTCTTGCCAAAATATTTTATATTATTTGTAACTTGAAAAAGGCGGTGTT
TCCC

Query= MSMg01no071_f23.b1 MSMg01no071_f23.b1 CHROMAT_FILE:
MSMg01no071_f23.b1 PHD_FILE: MSMg01no071_f23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:18:45 2005
         (493 letters)



>mm_chr3_63149479_63150371
          Length = 893

 Score =  940 bits (486), Expect = 0.0
 Identities = 489/490 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   attcactagctggctgcctagtgagcttcaatgatatactcatctctaccttctcagcac 63
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 attcactagctggctggctagtgagcttcaatgatatactcatctctaccttctcagcac 834

                                                                       
Query: 64  ttgaactcagatctgtcccaccgtgcctacttgtttttattgtttttgttgttgttgttt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 ttgaactcagatctgtcccaccgtgcctacttgtttttattgtttttgttgttgttgttt 774

                                                                       
Query: 124 tgtttttaaacatgagtttagagattaaactcaggttgaactcaggtcatgcttacaagg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 tgtttttaaacatgagtttagagattaaactcaggttgaactcaggtcatgcttacaagg 714

                                                                       
Query: 184 caagcctttaccaactgagcttttaggcaattttttattatattttttcctatatatttt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 caagcctttaccaactgagcttttaggcaattttttattatattttttcctatatatttt 654

                                                                       
Query: 244 tgaagttgacctttgcctatagattgatttgctccaatggctctgactggtctttacctt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 tgaagttgacctttgcctatagattgatttgctccaatggctctgactggtctttacctt 594

                                                                       
Query: 304 ttcttcagctttcttttttgtctcagcatccatccaagtaaggtcatccaaagtctgaat 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ttcttcagctttcttttttgtctcagcatccatccaagtaaggtcatccaaagtctgaat 534

                                                                       
Query: 364 aaaaacttcccggatttgtgcaatcaagtcttcaacctcaaaacaaaaggttattaatag 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 aaaaacttcccggatttgtgcaatcaagtcttcaacctcaaaacaaaaggttattaatag 474

                                                                       
Query: 424 tctaatatagtccatgagttctttcttcattacaggttttaaaacgaaggtgcatgctgc 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tctaatatagtccatgagttctttcttcattacaggttttaaaacgaaggtgcatgctgc 414

                     
Query: 484 ccttgtagat 493
           ||||||||||
Sbjct: 413 ccttgtagat 404


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 893
Length adjustment: 10
Effective length of query: 483
Effective length of database: 883
Effective search space:   426489
Effective search space used:   426489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)