GTCAAATTTGCGGCGCTATAGACTCCTATATTCAAGATCCGCGGATTCCC
CCCCCCCTTCTAGAAGGACTGAAGCATACACACTTTGGTCTTCCTTCTTC
TTGAGCTTCATGTGGTCTGTTAATTGTATCTTGGGTATTCAGAGCTTTGG
GGGCTAATATCCACTTATCAGTGAGTGCATATCATATGTGTTCTTTTGTG
TTTGTGTTAACTCACTCAGGATGATACTTTCTAGTTCCATCCATTTCATT
TGTCTAAGAATTTCATGAAGTCATTGTTTTTAATAGCTGAGTAGTACTTA
ATTGTATAAATGTACCACATTTTCTGTATCCATTTCTTTGTTGAAGGACA
TTTGGGTTCTTTCCAGCTTCTGGCTATTATAAACAAGGCTGCTAGGAACA
TAGCACAGCATGTGTCCTTGTTATATGTTGGAACATTTTTTGGGTGTACA
CCCAGGAGTGGTATAGCTGGGTCCTCAGTGTTGTGTCCAATTTTCTGAGG
AACCTACAGACAGATTTCCAGAGTGGTTGTACCAGCTTGCTTAGTAAGTC
AAAACTAACCTTTGTTCCTTATATTGCTCTTTTAATATTATTTTTGTCGT
AGCAGTAAAAAATAAACTAAAGCAATTAGGTAGAATTTAGCACTTTATTA
AATTATTAAGTGATTTCCAAAC

TTCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXATGTAAGAGTAAGGGGGAAGGCGGG
AGTGGATGGATGGGTGGGGGACCACCCTCACACCGGCCTGTCTATTTTTC
CACCCCTTCCCCCCCCCCCTCCCCTCCCCCCCCTTCTCCCCCCCTCCCCT
TTTCCCTTTCTTTCTTATCTCCTTCTTTTCCTTTCTCCTTTTCCTTTCTT
CTCCTTCTCTCTTCCTTTCTTTCCTTTCTCCTCCTCCTCCCCCTCCCTCC
CCCCCTCCCCCCTTTTCCCCCCCCCCCTCTTTTTTTTTTCCTCATCACTT
CCCCCTCCTCCCCCCCCTCTTTTTTTTTTTTCCTTCCCCTCTCCCTTCTC
CTTTTCCTTCCTTCCCATTTCTCCCGTTCCCTTTCTTCCCCCCCCTCTTC
CTCCTTCTTCTTCCCCTTCCCCTCTCTCCCCCTCCCTTCCCCCTCTCCCC
CTTTCCCTCCCCCTTTTTTCCTCCCCTCCCCCCTTCTCCTCTCCTCCCTT
CTCCCCCATCCTCCTTTCCCTCCCCCCTCCCCCCTTTCCTTCTCTTCCCC
CTATTTTCCTTCCCTTCCTTTCTCTTTCCTTCCTTTTTCTTTATCCCTCC
CTCCCTTTCTCTCTTCCCTCTCCTCCCCTTCCTCCTCCTTTTCCCCCCCC
CTTTCCTTCTCTTCTTTCCCTCTCTCTCACACTCCCTCATCTCTTCCCCT
G

Query= MSMg01no072_i21.b1 MSMg01no072_i21.b1 CHROMAT_FILE:
MSMg01no072_i21.b1 PHD_FILE: MSMg01no072_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:20 2005
         (634 letters)



>mm_chr3_77105666_77106699
          Length = 1034

 Score = 1133 bits (586), Expect = 0.0
 Identities = 613/622 (98%), Gaps = 1/622 (0%)
 Strand = Plus / Plus

                                                                       
Query: 14  ccccccttcta-gaaggactgaagcatacacactttggtcttccttcttcttgagcttca 72
           ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 213 ccccccttctaagaaggactgaagcatacacactttggtcttctttcttcttgagcttca 272

                                                                       
Query: 73  tgtggtctgttaattgtatcttgggtattcagagctttgggggctaatatccacttatca 132
           ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 273 tgtggtctgttaattgtatcttgggcattcagagctttgggagctaatatccacttatca 332

                                                                       
Query: 133 gtgagtgcatatcatatgtgttcttttgtgtttgtgttaactcactcaggatgatacttt 192
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 333 gtgagtgcatatcatatgtgttcttttgtgtttgtgttacctcactcaggatgatacttt 392

                                                                       
Query: 193 ctagttccatccatttcatttgtctaagaatttcatgaagtcattgtttttaatagctga 252
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ctagttccatccatttcatttgtctaagaatttcatgaagtcattgtttttaatagctga 452

                                                                       
Query: 253 gtagtacttaattgtataaatgtaccacattttctgtatccatttctttgttgaaggaca 312
           ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 453 gtagtacttcattgtataaatgtaccacattttctgtatccatttttttgttgaaggaca 512

                                                                       
Query: 313 tttgggttctttccagcttctggctattataaacaaggctgctaggaacatagcacagca 372
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tttgggttctttccagcttctggctattataaacaaggctgctaggaacatagcacagca 572

                                                                       
Query: 373 tgtgtccttgttatatgttggaacattttttgggtgtacacccaggagtggtatagctgg 432
           ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 573 tgtgtccttgttatatgttggaacattttttgggtgtacacccaaaagtggtatagctgg 632

                                                                       
Query: 433 gtcctcagtgttgtgtccaattttctgaggaacctacagacagatttccagagtggttgt 492
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 gtcctcagtgttgtgtccaattttctgaggaacctacagacagatttccagagtggttgt 692

                                                                       
Query: 493 accagcttgcttagtaagtcaaaactaacctttgttccttatattgctcttttaatatta 552
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 accagcttgcttagtaagtcaaaactaacctttgttccttatattgctcttttaatatta 752

                                                                       
Query: 553 tttttgtcgtagcagtaaaaaataaactaaagcaattaggtagaatttagcactttatta 612
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 tttttgtcgtagcagtaaaaaataaactaaagcaattaggtagaatttagcactttatta 812

                                 
Query: 613 aattattaagtgatttccaaac 634
           ||||||||||||||||||||||
Sbjct: 813 aattattaagtgatttccaaac 834


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space:   638976
Effective search space used:   638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)