Query= MSMg01no072_p14.b1 MSMg01no072_p14.b1 CHROMAT_FILE:
MSMg01no072_p14.b1 PHD_FILE: MSMg01no072_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:54 2005
(472 letters)
>mm_chr3_107073521_107074392
Length = 872
Score = 853 bits (441), Expect = 0.0
Identities = 462/469 (98%), Gaps = 2/469 (0%)
Strand = Plus / Minus
Query: 5 gaattcaggtgtttatgctttcaaggttttaccaatgagccacaccttcacctctttgaa 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gaattcaggtgttcatgctttcaaggttttaccaatgagccacaccttcacctctttgaa 613
Query: 65 cctattttatatcagagcctcag-ctatagaaggtcctaaagaaacatgtagtgagcaaa 123
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 612 cctattttatatcagagcctcagcct-tagaaggtcctaaagaaacatgtagtgagcaaa 554
Query: 124 tgggtgggaagataagctgatggccactcttatccaagcttctccagccatggagtaggc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tgggtgggaagataagctgatggccactcttatccaagcttctccagccatggagtaggc 494
Query: 184 aaggacatagggatggggctgtcagtaagtgaaggataaagttagtcactgtgtcccaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aaggacatagggatggggctgtcagtaagtgaaggataaagttagtcactgtgtcccaaa 434
Query: 244 gctgagctgagtcctgagtctagaagacacagtgaaatatattttcgatgagtcaaggtg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gctgagctgagtcctgagtctagaagacacagtgaaatatattttcgatgagtcaaggtg 374
Query: 304 ggctaaaaacattttggaacaggaagcaatttttcctttgctttattaattttgctccca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ggctaaaaacattttggaacaggaagcaatttttcctttgctttattaattttgctccca 314
Query: 364 aggataaatgacatacagagttctatatccaagcctttattagatgcccagttaatgcat 423
||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aggataaatgagatacagacttctatatccaagcctttattagatgcccagttaatgcaa 254
Query: 424 ccatgacaaatgggaatgaagtccttatgaataaaaagatgatcaacac 472
||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 253 ccatgacaaatgggaatgaagcccttatgaataaaaagatgatcaacac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_p14.g1 MSMg01no072_p14.g1 CHROMAT_FILE:
MSMg01no072_p14.g1 PHD_FILE: MSMg01no072_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:54 2005
(433 letters)
>mm_chr3_106950065_106950896
Length = 832
Score = 760 bits (393), Expect = 0.0
Identities = 423/433 (97%), Gaps = 1/433 (0%)
Strand = Plus / Plus
Query: 1 cagaaaagcgtattaaaggtcatcaaatgtgttagcgcggatcccccaggatcctgtaca 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagaaaggcgtattaaaggtcatcaaatgtgttagcgcggatcccccaggatcctgtaca 260
Query: 61 gcactccacgaggactgccttctgtagctaacaagcctgatcagatatgaagtttacaga 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcactccacgaggattgccttctgtagctaacaagcctgatcagatatgaagtttacaga 320
Query: 121 ctaaatgtagaaaatatttataatgtgtatataaagcaaaaggattatttgacaggtttt 180
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 321 ctaaatgtagaaaatatttataatgtgtatataaaacaaaaggattacttgacaggtttt 380
Query: 181 aagcaataattttaaatgcatttaaaagaccaaatacctaacatacattaaaaacaagta 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 aagcaataattttaaatgcatttaaaagacaaaatacctaacatacattaaaaacaagta 440
Query: 241 ggagctattcttaaaagtcagtaaaaatgacactcatctggcttgtatgccatttaagac 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 ggagctattcttaaaagtcagtaaaaatgacactcatctggcctgtatgccatttaagac 500
Query: 301 cctccatttcatttgtaaccagaatacttgtcaaaaatggttaaaaattataacccgttc 360
||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 501 cctccatttcatttgtaaccagaatacatgtcaaaaattgttaaaaattataacccgttc 560
Query: 361 gtattaaggaacactatagagacatttttctttttaattacaaatgtaggaaaggtaccc 420
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 561 atattaaggaacactatagagacatttttctttt-aattacaaatgtaggaaaggtaccc 619
Query: 421 aaaaatgttacag 433
|||||||||||||
Sbjct: 620 aaaaatgttacag 632
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 832
Length adjustment: 9
Effective length of query: 424
Effective length of database: 823
Effective search space: 348952
Effective search space used: 348952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
