Query= MSMg01no074_c24.b1 MSMg01no074_c24.b1 CHROMAT_FILE:
MSMg01no074_c24.b1 PHD_FILE: MSMg01no074_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:28 2005
(294 letters)
>mm_chr3_117449364_117450060
Length = 697
Score = 543 bits (281), Expect = e-159
Identities = 292/297 (98%), Gaps = 3/297 (1%)
Strand = Plus / Plus
Query: 1 agcaattcttcaacacttcgatgaaatatgacacttgtatcactacccactcaaaaggtg 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 agcaattcttcaacacttcgatgaaatatgacacttgcatcactacccactcaaaaggtg 260
Query: 61 agaccagttggaaaacacctccataagcccttattttggatcagtacaactaatcctcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaccagttggaaaacacctccataagcccttattttggatcagtacaactaatcctcaa 320
Query: 121 agttttctgctttctgttctctgactatgtatgccaaggaacatggcaactcccaatcta 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 agttttctgctttctgttctctgactatgtatgccaaggaacatggaaactcccaatcta 380
Query: 181 ataaccccagtctctgttattgtaagaattaatttgggcagaaggctaagccaatagtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataaccccagtctctgttattgtaagaattaatttgggcagaaggctaagccaatagtta 440
Query: 241 gaaatgaaagtccttcattatcagattgttaaaaaaaaaa---gcaattcttacaat 294
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 gaaatgaaagtccttcattatcagattgttaaaaaaaaaaaaagcaattcttacaat 497
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 697
Length adjustment: 9
Effective length of query: 285
Effective length of database: 688
Effective search space: 196080
Effective search space used: 196080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no074_c24.g1 MSMg01no074_c24.g1 CHROMAT_FILE:
MSMg01no074_c24.g1 PHD_FILE: MSMg01no074_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:28 2005
(291 letters)
>mm_chr3_117628674_117629364
Length = 691
Score = 536 bits (277), Expect = e-157
Identities = 283/285 (99%)
Strand = Plus / Minus
Query: 3 ccccagggaggactgcaaaaagtaacatttactaaccccaaataagcttgtgtttataat 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ccccagggaggactgcaaaaagtaacatttactaaccccaaataagcttgtgtttataat 428
Query: 63 ctattttaagcccttaacaaaagctaatcttttacttgttttaaaataattctcacctta 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ctattttaagcccttaacaaaagctaatcttttacttgttttaaaataattctcacctta 368
Query: 123 taaaacctagaatcaatacaagagagtgtagagaaaattaaatgtttttacttcaattag 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 taaaacctagaatcaatacaagagagtgtagagaaaattaaatgtttttacttcaattag 308
Query: 183 cctctagaaaagcagtgatttgaagtagaacaacacaaaaatattatatttgagttgcac 242
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 307 cctctagaaaagcagtgatttgaagtagaacaacacaaaaatattatatttaagttgcac 248
Query: 243 atagttttttcctgcaggcacaagtcacaactgcatgtagaaatc 287
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gtagttttttcctgcaggcacaagtcacaactgcatgtagaaatc 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
