GTCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTGTGCCTTTTTCTAACCATGGTTACCAGCCGTACATGTGGTAC
TTATACATGGATGTAGGCAAAATACCCATGCATAAAAATAATATCAATAT
GGGAGAAGAAAAATGGCCCAATGTCTTCATTGTTTAGAACATAGTTAAAA
CATCAGGCCCACTCTGAGAAGCCAAACAACTATAAGGTTCTTGAGCTATG
CTTTAAAACCCTGGCTACGAATTAAACCAGGAAGACTCCACAAATATACT
GTGAGCTCCATTCAAATTTTAAATATGGTTGGTATCACAGACTTTAAACT
GCCATCATCAGTGTTTCAAAAAGAAACAGTTTTGGTCTTCGGAAATTTAG
CTGGGATAACGTGTCAGGCCAGTGGCCTTTCTTCAATTCTTGGTGCACTC
TGCAAGCCACATTTGGGTTGTGCTTGTTTCCTGCAGAGGTCTTCAAGAGC
AGAGTTGACAGCAGTGTCCACATTTTGTGGGCATCACCTACAAGGTAGGA
AGGCTTTCATTGTCAAATTGTCTTCTAAGAAGCCCGCTGGGCTGGGCTGC
ATGAACTGTTGTAGCTTCATGAAGGTAGTCCTGGTGAAATACGTGGTATA
AATACTGATTGTCAAGCTCAGAATTTTTATTTGATTTTCTCC

CAATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTAGATACTTATTTTGATCCATAATG
AGCATTTATATATGTAACACACACACACACACACACACACACACACACAC
ACACACACACACACACACACTGGTGAAGACATAGCTGTGAGACATGTTGC
CCGAAATGACAGAATCCTTCAGAATGTATTCTCTTCATGCTTCGCAATGA
TAATGGGTTTCACATACTCTTATTACCCCTAAGGGAAGGGCCCCACACAG
GAGACAATTCCATCTAGTGCAAGTGCTGACACCTACTGGAAATTCCAACT
GTCCTCAGTTCCTATGGTTAGCTAAAAAGGAAGAAAAAAGAATACACAGA
AACAATATATTAAAACACACCAATGAAAAACCTTTATAACCCAAACAAAA
GAATTATAAAATTGAATAATGTAGGGCATTTATTCGATTGAATGTACTAG
TTTTAAAACACTGTCTGTAGATATACCACATCACATATTTATGACTATAA
ATATCCATGAGCAACCCAAAGTATAGATTTAAGAATGGATTTGATATATT
TTAATTCATGAATTTCTTCTTATTATTATTATGAATGTGTACAGATGTAT
ACACCAAAGACCAACCTTAAACAGTTTTCTTTTTGAAC

Query= MSMg01no074_h11.g1 MSMg01no074_h11.g1 CHROMAT_FILE:
MSMg01no074_h11.g1 PHD_FILE: MSMg01no074_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:22:50 2005
         (399 letters)



>mm_chr3_60454053_60454851
          Length = 799

 Score =  741 bits (383), Expect = 0.0
 Identities = 396/401 (98%), Gaps = 2/401 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttagatacttattttgatccataatgagcatttatatatgta--acacacacacacacac 58
           ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 697 ttagatacttattttgatccataatgagcatttatatatgtaacacacacacacacacac 638

                                                                       
Query: 59  acacacacacacacacacacacacacacacacacacactggtgaagacatagctgtgaga 118
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 acacacacacacacacacacacacacacacacacacactggtgaagacatagctgtgaga 578

                                                                       
Query: 119 catgttgcccgaaatgacagaatccttcagaatgtattctcttcatgcttcgcaatgata 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 catgttgcccgaaatgacagaatccttcagaatgtattctcttcatgcttcgcaatgata 518

                                                                       
Query: 179 atgggtttcacatactcttattacccctaagggaagggccccacacaggagacaattcca 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 atgggtttcacatactcttattacccctaagggaagggccccacacaggagacaattcca 458

                                                                       
Query: 239 tctagtgcaagtgctgacacctactggaaattccaactgtcctcagttcctatggttagc 298
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 457 tctagtgcaagtgctgacacctactggaaattccaactgtcctcagtttctatggttagc 398

                                                                       
Query: 299 taaaaaggaagaaaaaagaatacacagaaacaatatattaaaacacaccaatgaaaaacc 358
           ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 397 taaaaaggaagaaaaaagaatacacagaaacaatatattaaaaaataccaatgaaaaacc 338

                                                    
Query: 359 tttataacccaaacaaaagaattataaaattgaataatgta 399
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tttataacccaaacaaaagaattataaaattgaataatgta 297


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 64
Number of extensions: 28
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 23
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space:   308100
Effective search space used:   308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)