Query= MSMg01no076_c22.b1 MSMg01no076_c22.b1 CHROMAT_FILE:
MSMg01no076_c22.b1 PHD_FILE: MSMg01no076_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:04 2005
(634 letters)
>mm_chr3_147108347_147109381
Length = 1035
Score = 1151 bits (595), Expect = 0.0
Identities = 622/631 (98%), Gaps = 1/631 (0%)
Strand = Plus / Minus
Query: 5 gaattctttctttcctaacccacgttttgtggttaaacagatgaattccagatgtgagaa 64
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 835 gaattctttctttcctaaccgacattttgtggttaaacagatgaattccagatgtgagaa 776
Query: 65 gaatcgctcacattcataaggaatgcgatcctgactcattaagggaaagatgccattgct 124
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 gaatcactcacattcataaggaatgcgatcctgactcattaagggaaagatgccattgct 716
Query: 125 ttctggctccgaatgcgagattgcatttcctagacatgagagggaatagtgaaacttaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ttctggctccgaatgcgagattgcatttcctagacatgagagggaatagtgaaacttaac 656
Query: 185 cagagccataagggatacttcctgggtcaccaagaaggtcatcacatgagcataccgttt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 cagagccataagggatacttcctgggtcaccaagaaggtcatcacatgagcataccgttt 596
Query: 245 gatctcctgctggggtccatatgcctcattttcatgcagtcctgtgggcatcttccacgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gatctcctgctggggtccatatgcctcattttcatgcagtcctgtgggcatcttccacgt 536
Query: 305 cacaccttccctgctgcttaggtagaccaccgttggcacctgaacgacttatctcactga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 cacaccttccctgctgcttaggtagaccaccgttggcacctgaacgacttatctcactga 476
Query: 365 tctcatcctacggacgagcaatagaatcctagtttaaagtattgaactaagataaagacc 424
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tctcatcctacggatgagcaatagaatcctagtttaaagtattgaactaagataaagacc 416
Query: 425 caagaggagggaggaaaggtgtgtgcatgcctagcacccaccaggaagtgattac-gtcc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 415 caagaggagggaggaaaggtgtgtgcatgcctagcacccaccaggaagtgattacggtcc 356
Query: 484 tccagcaagcagccgggcctgaagaagggaggagaggaacaacaggtctcagatgctgca 543
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tccagcaagcagccaggcctgaagaagggaggagaggaacaacaggtctcagatgctgca 296
Query: 544 gcactacctgccctggtaaggctgggagcagcctgggcctcctctcctatacaagttgtt 603
|||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 295 gcaccagctgccctggtaaggctgggagcagcctgggcctcctctcctaaacaagttgtt 236
Query: 604 cagagttcagtctctgtgctctccagcttcc 634
|||||||||||||||||||||||||||||||
Sbjct: 235 cagagttcagtctctgtgctctccagcttcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1035
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1025
Effective search space: 639600
Effective search space used: 639600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_c22.g1 MSMg01no076_c22.g1 CHROMAT_FILE:
MSMg01no076_c22.g1 PHD_FILE: MSMg01no076_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:04 2005
(330 letters)
>mm_chr3_146925025_146925754
Length = 730
Score = 600 bits (310), Expect = e-176
Identities = 328/340 (96%), Gaps = 10/340 (2%)
Strand = Plus / Plus
Query: 1 tttccttcaatttttccttcctattactcagtagagaaattttctttagattaatcttaa 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttccttcaattttcccttcctattactcagtagagaaattttctttagattaatcttaa 260
Query: 61 agaaaactaataagggatataagagtccaacaaaatgtttctcctaaggacaaaattggg 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 agaaaactaataagggatataagagtccaacaaaatatttctcctaaggacaaaattggg 320
Query: 121 aaaagttcaacctggtatttgagtcaaagaattttagagggattttaggtacctttgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaagttcaacctggtatttgagtcaaagaattttagagggattttaggtacctttgctt 380
Query: 181 gcttgctgaatatatttcagatatgcacacacacacacacacacacacacacacacaca- 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcttgctgaatatatttcagatatgcacacacacacacacacacacacacacacacacac 440
Query: 240 ---------actccctggaaactaaaattgataaatgaagtttaaaaactggaagtatgt 290
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acacacacaactccctggaaactaaaattgataaatgaagtttaaaaactggaagtatgt 500
Query: 291 gtgtgtttaagtgtgattatgtttgtatatgtgtatgtat 330
||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgtgtttaagtgtgattatgtttgtatatgtgtatgtat 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 330
Length of database: 730
Length adjustment: 9
Effective length of query: 321
Effective length of database: 721
Effective search space: 231441
Effective search space used: 231441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
