Query= MSMg01no076_e08.b1 MSMg01no076_e08.b1 CHROMAT_FILE:
MSMg01no076_e08.b1 PHD_FILE: MSMg01no076_e08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:11 2005
(636 letters)
>mm_chr3_22342934_22343969
Length = 1036
Score = 1033 bits (534), Expect = 0.0
Identities = 591/636 (92%), Gaps = 40/636 (6%)
Strand = Plus / Minus
Query: 1 aatgagttcagtgagaccagaagatgccacgtgcctctgctggccaattctcctagccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aatgagttcagtgagaccagaagatgccacgtgcctctgctggccaattctcctagccca 566
Query: 61 gctttggagacagttgctgctatcaccaagtccaagatcaggtatttcatttgtttcttg 120
|||||| |||||||||||||||||||||
Sbjct: 565 gctttgaagacagttgctgctatcacca-------------------------------- 538
Query: 121 tcaccctcagagtagcactcctctactgatatggaccatattttactgatattgatgttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 --------agagtagcactcctctactgatatggaccatattttactgatattgatgttg 486
Query: 181 ttttatttctcttttgtttcctcttctctttggaagcagaaagtataaaagcaaaataag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ttttatttctcttttgtttcctcttctctttggaagcagaaagtataaaagcaaaataaa 426
Query: 241 ctcatttaagtgatttactctatgagttttatatatctagtctttaatttacagtacaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ctcatttaagtgatttactctatgagttttatatatctagtctttaatttacagtacaaa 366
Query: 301 aaaatctaccagtggatccttacatatactcaagattcagtcatgatgacatacatctat 360
||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 365 aaaatctaccaatggatccttacatatactcaagattcaatcatgatgacatacatctat 306
Query: 361 aatcccagaactcagacaggaagatgttcatgagtttgaaacaagcctgaactgaataat 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 305 aatcccagaactcagacaggaagatgttcatgagtttgaaaccagcctgaactgaataat 246
Query: 421 gcagggtggattccaggaaaacctagagtggactttctcccaaaaatgggagaggagcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gcagggtggattccaggaaaacctagagtggactttctcccaaaaatgggagaggagcaa 186
Query: 481 tacaacagaaggggagcaatatccaaaaaacaaaacccaggaaaggagctgcttgaggta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tacaacagaaggggagcaatatccaaaaaacaaaacccaggaaaggagctgcttgaggta 126
Query: 541 aactagagataggagacaatgtagatgcctgtgaccaaaagaaatatctatggatgagca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 aactagagataggagacaatgtagatgcctgtgaccaaaagaaatatctatggatgagca 66
Query: 601 tgccatcatcataccacttatttgttcacatcacta 636
||||||||||||||||||||||||||||||||||||
Sbjct: 65 tgccatcatcataccacttatttgttcacatcacta 30
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space: 642276
Effective search space used: 642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no076_e08.g1 MSMg01no076_e08.g1 CHROMAT_FILE:
MSMg01no076_e08.g1 PHD_FILE: MSMg01no076_e08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:11 2005
(221 letters)
>mm_chr3_22187831_22188451
Length = 621
Score = 364 bits (188), Expect = e-105
Identities = 209/222 (94%), Gaps = 12/222 (5%)
Strand = Plus / Plus
Query: 1 catatgccaggcattagaagaaaatagaagaggggtttggggtaccacatcctgggatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catatgccaggcattagaagaaaatagaagaggggtttggggtaccacatcctgggatta 260
Query: 61 ccttatcacttcagaaaaagacccttatgagatgttatggtttgaatatgaaaagttacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccttatcacttcagaaaaagacccttatgagatgttatggtttgaatatgaaaagttacc 320
Query: 121 aggccatctgaggctatttattgagatgaccatggagagagagagagagggagagagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 aggccatctgaggctatttattgagatgaccatggagagagagagagagagagagagaga 380
Query: 181 gaga----gagagaga----gagagaga----gagagagaga 210
|||| |||||||| |||||||| ||||||||||
Sbjct: 381 gagaatatgagagagaatatgagagagaatatgagagagaga 422
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 221
Length of database: 621
Length adjustment: 9
Effective length of query: 212
Effective length of database: 612
Effective search space: 129744
Effective search space used: 129744
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
