XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTG
AAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAATT
GACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGACAC
CGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTACCT
ATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCAAG
AAGGTGGAGCATGCTCTTATTGACATGCTGTATAGAGGGCAAACCCATAA
TTAAATCTTGAGTCTTTGTGGAACAGGATCTCTCCCATTCTTTCTGTTGT
TGTCCTGTCTTGGATATAAATGTTCCCCATGGGTTCAGGGTTAGAATGCT
TGTTTTCCAGTGATGGTGCTAATTTGTGAAGTTGGGGGAACAAGAAATAG
ATAGGGCAGAGTTGGAGGGACAGGGTTATTAGATATAGATCCTTGTGGAT
ATAGTACCCCTGGCCACTTCCTGCTTTGTTTACAGCTTCCTGGACTGGGT
GAAGTAAATAGTCATCTTTTGCCAATCTCCTACTGCTGTCACATCCAGTC
CAAATACATGGACTCAGACATTCAAACCAGGAACCAAAAGTTCCCCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTT

CGATGTAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCATAAGAAGAAATAGTACTGAGAATGA
CAGACAGGGTGGACAAAGCTCAGCATGGGTGGCTGGCATATTTTCAGAGG
AATTGAGGCTATGTAGGAGTAGAGAAAATCAGGAAGATATAATCAGGAAT
AAGGAGGAGCCACCCTGTCTCCAGTCCATGTTGTATATAGATCTCAGGAA
GAAATGGTTCCCTTCTAAGAGGGCTTCAGGAAGAAGGCATAATGTGGGTC
TCAGCCAAATTTGTCATTAGTAAAATCCTCTAAATGCTGAAACTCTTCTC
GAAACAGTCTGTTGATTTTGCTCTCATAAAAATTTAGCTATTCCCAGAAG
AGAAAGGCATGGTTCAGCTAAACCAGGATAATTTAGGGAGTGTCCAAACA
AATTGAAGGAAGAGGCGTTAGCCGATGATGTACTGAAGTTACAAATGTCC
CAATGTTAAGATTAGAGAGACTGGACAGAGGTTGGGGTAAGGTCAAGTTC
TCGAATGCACAATGCAATGCAGGTATACATTCAAGTGTGTGCCAAGAGAT
GTGTAGGGTATATTCAAAGATATATCAACATTAGGACTTGGGCACCTGGG
ATATTGGAGTTCTTAGAAATCTCAGATCAATACCCCTCAGTGAGGGATCC
CCTTAGTTCTGGTTGTGCCTTCCTTTGTGAT

Query= MSMg01no076_e18.g1 MSMg01no076_e18.g1 CHROMAT_FILE:
MSMg01no076_e18.g1 PHD_FILE: MSMg01no076_e18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:13 2005
         (563 letters)



>mm_chr3_67843599_67844561
          Length = 963

 Score = 1009 bits (522), Expect = 0.0
 Identities = 552/564 (97%), Gaps = 5/564 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cataagaag-aaatagtactgagaatgacagacagggtggacaaagctcagcatgggtgg 59
           ||||| ||| ||| ||| ||||||||    ||||||||| ||||||||||| ||||||||
Sbjct: 204 cataaaaagtaaacagtgctgagaat----gacagggtgaacaaagctcagaatgggtgg 259

                                                                       
Query: 60  ctggcatattttcagaggaattgaggctatgtaggagtagagaaaatcaggaagatataa 119
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ctggcatattgtcagaggaattgaggctatgtaggagtagagaaaatcaggaagatataa 319

                                                                       
Query: 120 tcaggaataaggaggagccaccctgtctccagtccatgttgtatatagatctcaggaaga 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tcaggaataaggaggagccaccctgtctccagtccatgttgtatatagatctcaggaaga 379

                                                                       
Query: 180 aatggttcccttctaagagggcttcaggaagaaggcataatgtgggtctcagccaaattt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aatggttcccttctaagagggcttcaggaagaaggcataatgtgggtctcagccaaattt 439

                                                                       
Query: 240 gtcattagtaaaatcctctaaatgctgaaactcttctcgaaacagtctgttgattttgct 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtcattagtaaaatcctctaaatgctgaaactcttctcgaaacagtctgttgattttgct 499

                                                                       
Query: 300 ctcataaaaatttagctattcccagaagagaaaggcatggttcagctaaaccaggataat 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctcataaaaatttagctattcccagaagagaaaggcatggttcagctaaaccaggataat 559

                                                                       
Query: 360 ttagggagtgtccaaacaaattgaaggaagaggcgttagccgatgatgtactgaagttac 419
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 560 ttagggagtgtccaaacaaattgaaggaagaggtgttagccgatgatgtactgaagttac 619

                                                                       
Query: 420 aaatgtcccaatgttaagattagagagactggacagaggttggggtaaggtcaagttctc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaatgtcccaatgttaagattagagagactggacagaggttggggtaaggtcaagttctc 679

                                                                       
Query: 480 gaatgcacaatgcaatgcaggtatacattcaagtgtgtgccaagagatgtgtagggtata 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gaatgcacaatgcaatgcaggtatacattcaagtgtgtgccaagagatgtgtagggtata 739

                                   
Query: 540 ttcaaagatatatcaacattagga 563
           ||||||||||||||||||||||||
Sbjct: 740 ttcaaagatatatcaacattagga 763


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space:   527009
Effective search space used:   527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)