ACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCCGCGG
AATTCAAAACTAATAACTACATAATTTTAATATTTGGAATTTCATACACT
GAAATATAATTCTGTCTATCTAGCATTCTCTTCCTCCAACTCCTACCATA
TCTTCCTCTATATCTCTGCTTCCAACTTTCATTCTGTCTGTTTCTCTTTC
AATAAGTCCATTTACTGCTGCTCAAAGGTCGATGTCTGTGGGGTACTAAC
TGGAGTACTCAAATCCTACAAGTTGCCATATCCTCACAAAAGAATGATTC
TCCTTCATATGAAATTATCTGCTGCCATTATTTCTCCAGTAAGGCAAGAG
CCTGAGAGAATTCTGTCTACACAATTTTGAGTGGCTTAATCTTGTTCAGG
TCTCATAAAGGTAACCATAGCAGCTGAGAGTTCCTGTGTGCAATAGCTAT
GCCATGCCTGTAAGACAGCACTCTTCCCTGTTCTCTTGTTTCATACATTA
TTTTGTGTCTGTTTAACATTGTGTTCCCTGCATATTGTCTGCCGTCTCCC
CCTTGTCCTCTGTACTCTTTCGTACAATTTCTCTTTTTATTCTTCTGCTT
ACTCCTTTCCCTCTTTTATTTCTCCCCCTTTCTCCTAAACTATCTCCTCC
CACCACCCTCCTCTCACTTTCCTTTCCCCTTATCTACTCTCATCCCTTTC
CCTTACCTCTACTCTTCCCTTCTTTTT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXATACAGTTGAATCCTTCTTAACAGTCT
GCTTTACGGGAACCTTTATCACCGTCGTTCCCCAGCTGATGAGTTCTGAA
TTCGGCAGTTGAATCCTTCTCAACAGTCTGTGTTACGGGAACCTTTATAA
ACGTGATCCGCAGTTCTGGTTCCGGAATGAGGGATCCTCCTTGCGCCAGT
CCCGAGTTTTTTTTTCTCGTCCCGGAATTCGGCACCAATTGTTATTCGAC
GCGTTCTCACGACCGGCCAGGAAGAACACCACAGACCAGAATCTTCTGCG
GCAAAGCTTTATTTCTTATATCTTCAGGAGCAAGCGTGTAAGAAGCAAGA
GAGCAGGAAGCAAGAGAGAGCCGAAAAGGCAGAATGGCGGGAACCCCGTC
CCTCTTAAGGAGCATTCTCCTTCGCCTCGGACGTGTCACTCCCTGATTGG
CTGCAGCCCATCGGCCGAGTTGACGTCACGGGGAAGGCAGAGCACAAGTA
GTCATAAGATACCCTTGGCACATGCGCAGATTATTTGTTTACCACTTAGA
ACACAGGATGTCAGCGCCATCTTGTAACGGCGAATGTGGGGGCGGCTCCC
AACAAAAGGAGTCTTAGGAAATTGCACTGTTGTTATTTTGTGCGTGTGTG
TCTTTGAA

Query= MSMg01no076_m08.b1 MSMg01no076_m08.b1 CHROMAT_FILE:
MSMg01no076_m08.b1 PHD_FILE: MSMg01no076_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:25:52 2005
         (374 letters)



>mm_chr3_110302812_110303584
          Length = 773

 Score =  690 bits (357), Expect = 0.0
 Identities = 366/369 (99%), Gaps = 1/369 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattcaaaactaataactacataattttaatatttggaatttcatacactgaaatataa 65
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcaaaactaaaaactacataattttaatatttggaatttcatacactgaaatataa 265

                                                                       
Query: 66  ttctgtctatctagcattctcttcctccaactcctaccatatcttcctctatatctctgc 125
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ttctgtctttctagcattctcttcctccaactcctaccatatcttcctctatatctctgc 325

                                                                       
Query: 126 ttccaactttcattctgtctgtttctctttcaataagtccatttactgctgctcaaaggt 185
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 326 ttccaactttcattctgtctgtttctctttcaataagtccatttactgctgctcaa-ggt 384

                                                                       
Query: 186 cgatgtctgtggggtactaactggagtactcaaatcctacaagttgccatatcctcacaa 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cgatgtctgtggggtactaactggagtactcaaatcctacaagttgccatatcctcacaa 444

                                                                       
Query: 246 aagaatgattctccttcatatgaaattatctgctgccattatttctccagtaaggcaaga 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aagaatgattctccttcatatgaaattatctgctgccattatttctccagtaaggcaaga 504

                                                                       
Query: 306 gcctgagagaattctgtctacacaattttgagtggcttaatcttgttcaggtctcataaa 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcctgagagaattctgtctacacaattttgagtggcttaatcttgttcaggtctcataaa 564

                    
Query: 366 ggtaaccat 374
           |||||||||
Sbjct: 565 ggtaaccat 573


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 773
Length adjustment: 9
Effective length of query: 365
Effective length of database: 764
Effective search space:   278860
Effective search space used:   278860
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)