Query= MSMg01no079_k09.b1 MSMg01no079_k09.b1 CHROMAT_FILE:
MSMg01no079_k09.b1 PHD_FILE: MSMg01no079_k09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:20 2005
(538 letters)
>mm_chr3_84222482_84223418
Length = 937
Score = 951 bits (492), Expect = 0.0
Identities = 520/534 (97%), Gaps = 9/534 (1%)
Strand = Plus / Minus
Query: 5 gaattccttcaacattgaggaagtcagaaccagctgcaaacgtgtagaggaaggactgag 64
||||||||||||||| |||||||||||||||||| ||||||||||||| ||||
Sbjct: 635 gaattccttcaacatcgaggaagtcagaaccagc--------tgtagaggaaggattgag 584
Query: 65 acttacttgactgagctatcaccatgtgtgagtgttccactctggtctttctcttgaagt 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 583 acttacttgactgagctatcaccatgtgtgagtgttccactctggtctttctcttgaatt 524
Query: 125 cggtaccccacaaatttgcgaaaaggtaggctctgagcaggacaggggattgcaaagcca 184
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 c-gtaccccacaaatttgcgaaaaggtaggctctgagcaggacaggggattgcaaagcca 465
Query: 185 gagcagattcaggcctgatccttcagtctcctggagattaagagatgtttcggttaccta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gagcagattcaggcctgatccttcagtctcctggagattaagagatgtttcggttaccta 405
Query: 245 tggcatataacaaaacacctccaattgtagtagtttaagccagcaaccggactcatttgc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tggcatataacaaaacacctccaattgtagtagtttaagccagcaaccggactcatttgc 345
Query: 305 tcaaagctccgcaagtagagcagggcgcatgcgcacagctcatctctgccccacatcggc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tcaaagctccgcaagtagagcagggcgcatgcgcacagctcatctctgccccacatcggc 285
Query: 365 taggctggggtgtttccatgggagttggaagagctggttggcctcattcacatgtctggc 424
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 284 taggctggggtgtttccatgggagttggaagagctggttggcctcattcacatgcctggc 225
Query: 425 acctcagtgggggtggatggaataactgggggagggttgagccctctcccttccggcccc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 acctcagtgggggtggatggaataactgggggagggttgagccctctcccttccggcccc 165
Query: 485 caccccatggagcaataagatttgtttacagggcagctgactttcgtgaggaca 538
||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 164 caccccatggagcaataagatttgtttaccgggcagctgactttcgtgaggaca 111
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 937
Length adjustment: 10
Effective length of query: 528
Effective length of database: 927
Effective search space: 489456
Effective search space used: 489456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_k09.g1 MSMg01no079_k09.g1 CHROMAT_FILE:
MSMg01no079_k09.g1 PHD_FILE: MSMg01no079_k09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:20 2005
(116 letters)
>mm_chr3_84143668_84144183
Length = 516
Score = 203 bits (105), Expect = 3e-57
Identities = 114/117 (97%), Gaps = 2/117 (1%)
Strand = Plus / Plus
Query: 1 caggttaacctgagccac-caatgagacactcaaacatcaacaaaacaagaacttaccga 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggttaacctgagccacacaatgagacactcaaacatcaacaaaacaagaacttaccga 260
Query: 60 acaaaagcaccagaacgcagcttgtgcagctctgggggggatggtgggtgggtgtga 116
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 261 acaaaagcaccagaacgcagcttgtgcagctctggaggggatggtgg-tgggtgtga 316
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 116
Length of database: 516
Length adjustment: 8
Effective length of query: 108
Effective length of database: 508
Effective search space: 54864
Effective search space used: 54864
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
