Query= MSMg01no080_a05.b1 MSMg01no080_a05.b1 CHROMAT_FILE:
MSMg01no080_a05.b1 PHD_FILE: MSMg01no080_a05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:47 2005
(625 letters)
>mm_chr3_140765216_140766241
Length = 1026
Score = 1129 bits (584), Expect = 0.0
Identities = 611/620 (98%), Gaps = 1/620 (0%)
Strand = Plus / Plus
Query: 7 gaattctctgaccctctttgac-cagatgaaagacataaaattcaggaatactttccacc 65
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctctgaccctctttgacacagatgaaagacataaaattcaggaatactttccacc 266
Query: 66 aattacaaacatacaaataactgttacataacttaccacaaatacacacttaaaagagca 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aattacaaacatacaaataactgttacataacttaccacaaatacacacttaaaagagca 326
Query: 126 gatgttaaaagaataaaagcaggctgcttctgacctgaatattacatgttgtcctcctta 185
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 327 gatgttaaaagaataaaagcaggctgcttcggacctgaatattacatgttgtcctcctta 386
Query: 186 ggtaagatgaggaacatttgtgttgactagacatcagttcttctataaagaatttagaat 245
|||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 387 ggtaagatgaggaacatttgtgttgactagacatcaattcttctataaagtatttagaac 446
Query: 246 ttggaatttccattaaatatcaattgaagaaatagtaaatgtatgacaaacacttatttt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttggaatttccattaaatatcaattgaagaaatagtaaatgtatgacaaacacttatttt 506
Query: 306 ggagtattaaaaaatagagaactaagaaatcagagaggtgccatgtcttctaaacttttg 365
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 507 ggagtattaaaaaatagagaactaagaaatcagagaggtgtcatgtcttctaaacttttg 566
Query: 366 tcattaagaatggatgagttatagtcatcacaataaaatttttatttgtggcaaatgtta 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tcattaagaatggatgagttatagtcatcacaataaaatttttatttgtggcaaatgtta 626
Query: 426 agctttgtgcaacattagctcaactctaaaatattgagtcatggtatctcaaccacaaga 485
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 627 agctttgtgcaacattagctcaactctaaaatattgagtcatggtgtctcaatcacaaga 686
Query: 486 cacttttttaatgtggtgtgtgcaataaaagaatctggcatttccatttgggaacatgta 545
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 687 cacttttttaatgtggtgtgtgcaataaaagaatctggcattttcatttgggaacatgta 746
Query: 546 acaaatgttgtatccgtctaatatgttgttgtgacataactaggagctttgcaaagggat 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 acaaatgttgtatccgtctaatatgttgttgtgacataactaggagctttgcaaagggat 806
Query: 606 ttggtgcaagcagagaatgt 625
||||||||||||||||||||
Sbjct: 807 ttggtgcaagcagagaatgt 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1026
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1016
Effective search space: 624840
Effective search space used: 624840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_a05.g1 MSMg01no080_a05.g1 CHROMAT_FILE:
MSMg01no080_a05.g1 PHD_FILE: MSMg01no080_a05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:47 2005
(181 letters)
>mm_chr3_140920800_140921380
Length = 581
Score = 340 bits (176), Expect = 2e-98
Identities = 179/180 (99%)
Strand = Plus / Minus
Query: 1 ttctggcaaaagaccataaaggtaatgaaggtgtcctctgttacttttccttgtcaccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ttctggcaaaagaccataaaggtaatgaaggtgtcctctgttacttttccttgtcaccac 278
Query: 61 ccgtcttagcaatatggttatggggaaaggaactaccataatgtatttgcatctgaaaaa 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 277 ccgtcttagcaatatggttatggggaaaggaactaccataatgcatttgcatctgaaaaa 218
Query: 121 tcaaagctgggtgatcagaggagaaggaagaggaggaggaagagaaggaggaggaggagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 tcaaagctgggtgatcagaggagaaggaagaggaggaggaagagaaggaggaggaggagg 158
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 181
Length of database: 581
Length adjustment: 8
Effective length of query: 173
Effective length of database: 573
Effective search space: 99129
Effective search space used: 99129
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
