AATTTGCGGCGCTAAACGACTCCTATTCCGAGAGGATCCGCGGAATTCCA
CAGAATACCTGATTTTGATTTTTTTGTTTTTGTTTTTGTACACAAGTTTT
CATTTCACTTCTGCGCCAGGTTTATGTGAATGAACCCAGATGAGCAGGAG
ATCCCCATCATCAGTGCACACTCAGTGCTTCGGTCCCTTCATCACTGCCT
CAGTTAAGTTAGGACTGTTCTTTTCCTAGGCATTCTCTTTTCTACATCCT
TAAATACAACATCTTAGCTTTTAGATTTTAATGTTAAAGTTGTTTGTTAT
ACTGATCCTGCTTCCTTTCCACATGGTTTACCTGGTCTAGCAATGCCACC
CACTTTCTCAAACCTTGGTTTTGTTTTGCTTTGTTTTGTTTTGGGCTGGC
TTGGTTTGGTTTATTTCATTACAACTTTTCCGTCCTGACTTTCACACCTC
ATTCATTTCCCCATTCTTTTTCCCTTTATTTTTCTTTTTTCCCTTTACCC
CTTTATCGCTTTACTCCTTGTCCCTCCTTTACCTTTCTATCTCCCCCCCC
CTTCCCCCCCCTTTTCCTCTCCCTCCCCTTTTTTCCCTTAGTTTTCCCCT
TTTTTTTATTCTCCCCTCATTCCACCCCTTACTTTCTTTCCCTCCTTTAC
CCCCTTCATTCTTTTTCCCCCTTTTCTTTTCTTTCTTTCCCCCCCCCTTT
CTCTTTTT

AATGTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTGTGCTCTTTCAGAGGTAAGCATTTACAAAC
AGGGAAGTGCATTCACTATCCTCACACACTGGCAAAGAGAAAATTCTGAG
GCAAAGACTTGTTATTGAATAAAGGGCACAATTCTATAAGTAAGCTCTCT
CTGGCTCATGTGACCTGTGCTGTGGAAGGTATTTAGCATGCAACCAAGGC
AGAGTTCTGAGATACCACAGAGCCATGCTATGCAGATACGGAGAGGGATG
AAACACATTCAGACAGGGAAGACAAGGGAACTCTTGGGATGGTGAACAGG
CAGATAAAAAAATGCAGCAGAGGGGAACATCCAGCTGGGCCTCTCAGACA
AGTGAAAGCCTGGTGTACAAGGACTAGGACATCAAGTAGGGATACATTTT
CTCAGATGGGAAGCACATGGCTCTGGGTGGCAGAAGTGGGCATGACAGGA
GCCTAGAAGGTTTGGATGGCTGGATTTGCATGAGTGTAGAAGACAGGCTG
CTACCACAGCACCATTCGAACCAGTCTGCAGCCATCCCGAGCCTCCATGA
CTGCGACCACAGAGGATAGAGCAGAGAGAAGGGCCTGAAAGACAGTTCAA
AGGCAAAATGACAAGACTCAATGACAGGTTGAATAGTAGGCTTGTATG

Query= MSMg01no081_c06.b1 MSMg01no081_c06.b1 CHROMAT_FILE:
MSMg01no081_c06.b1 PHD_FILE: MSMg01no081_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:15 2005
         (357 letters)



>mm_chr3_156461547_156462303
          Length = 757

 Score =  632 bits (327), Expect = 0.0
 Identities = 342/347 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   ggaattccacagaatacctgattttgatttttttgtttttgtttttgtacacaagttttc 64
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattccacagaatacatgattttgatttttttgtttttgtttttgtacacaagttttc 264

                                                                       
Query: 65  atttcacttctgcgccaggtttatgtgaatgaacccagatgagcaggagatccccatcat 124
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 265 atttcacttctgcgccaggtttatgtgaatgaacccagatgagcaggggatccccatgat 324

                                                                       
Query: 125 cagtgcacactcagtgcttcggtcccttcatcactgcctcagttaagttaggactgttct 184
           ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 325 cagtggacactcagtgcttcggtcccttcatcactacctcagttaagttaggactgttct 384

                                                                       
Query: 185 tttcctaggcattctcttttctacatccttaaatacaacatcttagcttttagattttaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttcctaggcattctcttttctacatccttaaatacaacatcttagcttttagattttaa 444

                                                                       
Query: 245 tgttaaagttgtttgttatactgatcctgcttcctttccacatggtttacctggtctagc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgttaaagttgtttgttatactgatcctgcttcctttccacatggtttacctggtctagc 504

                                                          
Query: 305 aatgccacccactttctcaaaccttggttttgttttgctttgttttg 351
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aatgccacccactttctcaaaccttggttttgttttgctttgttttg 551


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 757
Length adjustment: 9
Effective length of query: 348
Effective length of database: 748
Effective search space:   260304
Effective search space used:   260304
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no081_c06.g1 MSMg01no081_c06.g1 CHROMAT_FILE:
MSMg01no081_c06.g1 PHD_FILE: MSMg01no081_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:15 2005
         (537 letters)



>mm_chr3_156610541_156611477
          Length = 937

 Score =  984 bits (509), Expect = 0.0
 Identities = 530/537 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgtgctctttcagaggtaagcatttacaaacagggaagtgcattcactatcctcacacac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 tgtgctctttcagaggtaagcatttacaaacagggaagtgcattcactatcctcacacac 678

                                                                       
Query: 61  tggcaaagagaaaattctgaggcaaagacttgttattgaataaagggcacaattctataa 120
           ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 677 tggcaaagagaaaattctgagacaaagacttgttattgaataaagggcacaaatctataa 618

                                                                       
Query: 121 gtaagctctctctggctcatgtgacctgtgctgtggaaggtatttagcatgcaaccaagg 180
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gtaagctctcactggctcatgtgacctgtgctgtggaaggtatttagcatgcaaccaagg 558

                                                                       
Query: 181 cagagttctgagataccacagagccatgctatgcagatacggagagggatgaaacacatt 240
           |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 557 cagagttctgggataccacagagccatgctatgcagttacggagagggatgaaacacatt 498

                                                                       
Query: 241 cagacagggaagacaagggaactcttgggatggtgaacaggcagataaaaaaatgcagca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cagacagggaagacaagggaactcttgggatggtgaacaggcagataaaaaaatgcagca 438

                                                                       
Query: 301 gaggggaacatccagctgggcctctcagacaagtgaaagcctggtgtacaaggactagga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gaggggaacatccagctgggcctctcagacaagtgaaagcctggtgtacaaggactagga 378

                                                                       
Query: 361 catcaagtagggatacattttctcagatgggaagcacatggctctgggtggcagaagtgg 420
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 377 catcaagtagggatacattttctcagataggaagcacatggctctgggtggcagaagtgg 318

                                                                       
Query: 421 gcatgacaggagcctagaaggtttggatggctggatttgcatgagtgtagaagacaggct 480
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 317 gcatgacaggagcctagaaggtttggatggctggatttgcatgagtatagaagacaggct 258

                                                                    
Query: 481 gctaccacagcaccattcgaaccagtctgcagccatcccgagcctccatgactgcga 537
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gctaccacagcaccattcgaaccagtctgcagccatcccgagcctccatgactgcga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space:   488529
Effective search space used:   488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)