Query= MSMg01no083_p17.b1 MSMg01no083_p17.b1 CHROMAT_FILE:
MSMg01no083_p17.b1 PHD_FILE: MSMg01no083_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:52 2005
(637 letters)
>mm_chr3_24845394_24846429
Length = 1036
Score = 1085 bits (561), Expect = 0.0
Identities = 615/633 (97%), Gaps = 1/633 (0%)
Strand = Plus / Plus
Query: 5 gaattctcattctaccaaaacattcaaaaccaggtggtcaaaccatcaagcttccctttg 64
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcattcaagcaaaacattcaaaaccaggtggtcaaaccatcaagcttccctttg 264
Query: 65 acacatgggattcacaatctcgaaaacatacacagtcatccaccttctacaatgctgtat 124
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 265 acacatgggattcacaatctcgaaaacatacaca-tcatccaccttctacaacgctgtat 323
Query: 125 tttaccacagccacgaatggaattatactttggcatagggtttaataatggaaattttat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tttaccacagccacgaatggaattatactttggcatagggtttaataatggaaattttat 383
Query: 185 gagtgggtcaacctatactattatgtgaaattaataatttgaaagcaaatatttgtatta 244
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gagtgggttaacctatactattatgtgaaattaataatttgaaagcaaatatttgtatta 443
Query: 245 ggctaattgatcctagaattcttcttcaaagtttttatattacatgatttatgtattgac 304
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggccaattgattctagaattcttcttcaaagtttttatattacatgatttatgtattgac 503
Query: 305 caggtgctagtgatagtaaatgctagattattttcttagccacggcatggctgtctaatg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 caggtgctagtgatagtaaatgctagattattttcttagccacggcatggctgtctaatg 563
Query: 365 tgcaccatgttaaattaacataagaatgttaattagtgaagctgaagaaaaaggtttctc 424
|| | ||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 564 tgtattatgttaaattaacataagaatgttaattagtgaagctgaagaaaaagatgtctc 623
Query: 425 agcgctaacattgcatgcagctcctgtagaagactaacatttagtcgctaacacacatac 484
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agtgctaacattgcatgcagctcctgtagaagactaacatttagtcgctaacacacatac 683
Query: 485 tgtgtagcccacaactgccattaactcaggtaccgggagacccgacacttctagcatatg 544
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 684 tgtgtagcccacaactgccattaactcaggtaccaggagaccagacacttctagcatatg 743
Query: 545 caggcatttgcacacatatgcacacacacacacgtgcacctgtaaaatagtttttttttt 604
|||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 744 caggcatttgcacacatatgaacacacacacacgtgcacccgtaaaatagtttttttttt 803
Query: 605 taagtttcatctttacatctaatcataatgtgg 637
||||||||||||||||||||||||||||||||
Sbjct: 804 aaagtttcatctttacatctaatcataatgtgg 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1036
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1026
Effective search space: 643302
Effective search space used: 643302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_p17.g1 MSMg01no083_p17.g1 CHROMAT_FILE:
MSMg01no083_p17.g1 PHD_FILE: MSMg01no083_p17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:52 2005
(425 letters)
>mm_chr3_24996986_24997810
Length = 825
Score = 636 bits (329), Expect = 0.0
Identities = 368/381 (96%), Gaps = 3/381 (0%)
Strand = Plus / Minus
Query: 1 aggtcagcaagcttgacagccagagtctttacacactgaatcattttgtcagcctgattt 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aggtcaacaagcttgacagccagagtctttacacactgaatcattttgtcagcctgattt 320
Query: 61 ttgatttttgagattgtttttgtccatatgtgtttaggaaaatttccagcaatgtcaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttgatttttgagattgtttttgtccatatgtgtttaggaaaatttccagcaatgtcaact 260
Query: 121 ctactgaatttcttttgtatatttaggaataatgtcatctgaaaattgagataggggtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ctactgaatttcttttgtatatttaggaataatgtcatctgaaaattgagataggggtat 200
Query: 181 gtcttagtcagggtttctattcctgcacaaacatcatgaccacaaagcaagttggggagg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 gtcttagtcagggtttctattcctgcacaaacatcatgaccacaaagcaagttggggaga 140
Query: 241 aaagggtttattcagcttacacttccatattgctgttcatcaccaaagga-agtcaggac 299
||||||||||||||| ||||| ||||| | | ||||| |||||||||||| | |||||||
Sbjct: 139 aaagggtttattcagtttacatttccacactactgtt-atcaccaaaggata-tcaggac 82
Query: 300 tggaactcaagcaggtcaggaagcaggagctgatgcagagccatggagggatgttccttg 359
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 81 tgaaactcaagcaggtcaggaagcaggagctgatgcagagccatcgagggatgttccttg 22
Query: 360 ctggcttgcctcccctggctt 380
||||||||| |||||||||||
Sbjct: 21 ctggcttgcttcccctggctt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
