Query= MSMg01no084_k03.b1 MSMg01no084_k03.b1 CHROMAT_FILE:
MSMg01no084_k03.b1 PHD_FILE: MSMg01no084_k03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:42 2005
(294 letters)
>mm_chr3_138523255_138523949
Length = 695
Score = 532 bits (275), Expect = e-155
Identities = 287/291 (98%), Gaps = 1/291 (0%)
Strand = Plus / Minus
Query: 5 gaattctctgggaag-tactctcacgttttgtatttttgaaaactaaattattttaccat 63
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gaattctctgggaagcaaatctcacgttttgtatttttgaaaactaaattattttaccat 436
Query: 64 catcatatatttctgtcacctctgctacttgtattcctaaaaagaagcaattacatacca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 catcatatatttctgtcacctctgctacttgtattcctaaaaagaagcaattacatacca 376
Query: 124 gggcccagccatccaagttcttaagcggcttctaaacgagcactccttactcctgtttgc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gggcccagccatccaagttcttaagcggcttctaaacgagcactccttactcctgtttgc 316
Query: 184 ttaagatgtagcaatttcacctgcgatctgtccagactgaaacaaagttcccgaccagca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ttaagatgtagcaatttcacctgcgatctgtccagactgaaacaaagttcccgaccagca 256
Query: 244 ctgcaggaagcagagcctcaccaacagcctcaccaacagcggactaacgtt 294
||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ctgcaggaagccgagcctcaccaacagcctcaccaacagcggactaacgtt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 695
Length adjustment: 9
Effective length of query: 285
Effective length of database: 686
Effective search space: 195510
Effective search space used: 195510
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no084_k03.g1 MSMg01no084_k03.g1 CHROMAT_FILE:
MSMg01no084_k03.g1 PHD_FILE: MSMg01no084_k03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:43 2005
(233 letters)
>mm_chr3_138486359_138486991
Length = 633
Score = 451 bits (233), Expect = e-131
Identities = 233/233 (100%)
Strand = Plus / Plus
Query: 1 accatcctcctgcctcagcctcctgtgtcatcacatctagcctcaaattttcatagacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accatcctcctgcctcagcctcctgtgtcatcacatctagcctcaaattttcatagacac 260
Query: 61 cctcccctgcaaaggggactgaaaggttgttcaaaagtttgtgtataaaattccgacagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctcccctgcaaaggggactgaaaggttgttcaaaagtttgtgtataaaattccgacagc 320
Query: 121 aggagagctgagaggctgggggccgcgctaagcagtgatcagctaagtatggtttcaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggagagctgagaggctgggggccgcgctaagcagtgatcagctaagtatggtttcaaga 380
Query: 181 gtctcgctaaaacactcaacggttacacgaagcatgcgagtgtattttacatt 233
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtctcgctaaaacactcaacggttacacgaagcatgcgagtgtattttacatt 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
