TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGCTCAACAAGTTGGCCCTGGACATTTTAAAAATAGGTCTATAT
AAATTGTTTATCTGATGCTAATTTACTATGGTAAATGATATCTACAGAAA
AAATACCCATTTCTTTTAGATTTTCTAATTTTATGGAGTATAGGTTTTTA
ACCTTATGATTCTCTGAATTCCCTTGTTGTTATGTCCTTTTTTCTGTTTT
GGGTTTTATTAAGTTTACTGTTCTCTGGTTTTTAGTTAGTTTGAATAAGG
GTGTGTTTATTTTTTTTTTCAAACAATAATTTTTTTGCCACAACTGCACT
TTTTTTTCTTCCCCCCCCTCCTTTCCTTTTCCTTCTTCTTTTTATTACCT
TCATTTTCCCCCCTTTTTTTTTTTTTTTCTCCCCCCCCCACCTTCTTACT
CTTTTTTTTACCCTTTATATTATCTCATTTACGTACTTTTCCCCTATTAA
CCCTCACCATTTTCCTACTTTATCTCTCTCTTTACCCCTTTTTCCCCTTT
TATCCAAATCACATTCTAATATTATTATTTCACTCCGCCCCTTTCTCATA
CCTTATTCTTACTCTCCTTCTTGCACCGCTTTTATTTTCCCGTCTTTTGC
GCCCGCCCATTTCCCCATCTGTTTTCCCCTCCTCCCCCTCCCCTCCTCTT
CATTCTCTTTTTTTCTTCCTTCCGCTCTAACTCACTATTCTCA

AATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXATATATTCCAGATAACATTCAAGAT
AAGACATAAATACGTATACAGTTATACATTCATTCTAAAAATTGCATTCA
AGGTATAAAATGCATCTATATTTTAAATCTAGAATTTTTACTGTTACTTA
ACAAATGTGTATATTACTGTAAATTATTCACAGATAGACTGTAATTTTGA
TATAAATCTCACAGCATTTGTATCTTAAATATGTGCATTTTCTAGTTATT
TTATGTCTTGATTGATCCTTGTGGTATCTTATTTATGCTTTATAGAACAT
AAGCATAAAACTAAACGTGATAGTATCAATTTACTTAAAATATGTAAATA
ATATCTAAAATATTTTATTAAAATATTAACAAGTTTATATGTTGAGATTA
AAATTATATTTTTAAGCAAACATAGCAGGGAAAACTCTTTAATTAATACA
TTTGTCTGCTAAGTTAGCAAGTAAAATGATTAGTACTTTTGAAATGTCAA
ATTATATGACACTTGTAGAGCACTGTAAGTCAGATATTTAGAGTAAAGGA
ATTAAACTGAAAATAAATAAAATTAGTGGAGTGGAAAAAAAGCAATTGAT
ATATTATATTTAAATATTTATAAATACTTTCAGGCAACAGAAATGTCAGC
AGCT

Query= MSMg01no087_c12.g1 MSMg01no087_c12.g1 CHROMAT_FILE:
MSMg01no087_c12.g1 PHD_FILE: MSMg01no087_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:10 2005
         (551 letters)



>mm_chr3_72655990_72656940
          Length = 951

 Score =  957 bits (495), Expect = 0.0
 Identities = 507/513 (98%), Gaps = 4/513 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   atatattccagataacattcaagataagacataaatacgtatacagttatacattcattc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 atatattccagataacattcaagataagacataaatacgtatacagttatacattcattc 450

                                                                       
Query: 61  taaaaattgcattcaaggtataaaatgcatctatattttaaatctagaatttttactgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 taaaaattgcattcaaggtataaaatgcatctatattttaaatctagaatttttactgtt 390

                                                                       
Query: 121 acttaacaaatgtgtatattactgtaaattattcacagatagactgtaattttgatataa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 acttaacaaatgtgtatattactgtaaattattcacagatagactgtaattttgatataa 330

                                                                       
Query: 181 atctcacagcatttgtatcttaaatatgtgcattttctagttattttatgtcttgattga 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 329 atctcacagcatttgtatcttaaatatgtgcattttctagttattttatgtcttgattaa 270

                                                                       
Query: 241 tccttgtggtatcttatttatgctttatagaacataagcataaaactaaacgtgatagta 300
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tccttgtggtatattatttatgctttatagaacataagcataaaactaaacgtgatagta 210

                                                                       
Query: 301 tcaatttacttaaaatatgtaaataatatctaaaatattttattaaaatattaacaagtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tcaatttacttaaaatatgtaaataatatctaaaatattttattaaaatattaacaagtt 150

                                                                       
Query: 361 tatatgttgagattaaaattatatttttaagcaaacatagcagggaaaactctttaatta 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||    |||||
Sbjct: 149 tatatgttgagattaaaattatatttttaagcaaacatagcagggaaaact----aatta 94

                                                                       
Query: 421 atacatttgtctgctaagttagcaagtaaaatgattagtacttttgaaatgtcaaattat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93  atacatttgtctgctaagttagcaagtaaaatgattagtacttttgaaatgtcaaattat 34

                                            
Query: 481 atgacacttgtagagcactgtaagtcagatatt 513
           |||||||||||||||||||||||||||||||||
Sbjct: 33  atgacacttgtagagcactgtaagtcagatatt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space:   509081
Effective search space used:   509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)