XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCCGCGGAATTCCTT
ACAATCTCAGAAGTGCAATAAGCTGGTGTTAAATTAGCACCTCTGTTTGC
TTTTTTCTTAGACTTGTCAAAAGAAAGATTAATGAGCAGGTTTTCTGCAC
TCAACTATAGCTTTTCTTAGAGGAATGTGGTGTCTACATCAAAATCCCAT
TTAGATGCAGAAAAACTCACTTGCAAGCAAAGATACCTTTTCACCTTTCT
TCTAGTTTCCCATTCTTATTTTTTTCCTAGCAAGCAAACATTTACTCCTA
TTTAGGTGTCCTTCAGCAACCTTCCCAACCCTCTGATGCCATGTATTATT
GTTTGAGTCTCACTAAGTAAGATGGAAAAAAAATGAGAGTTCAGCAAAGG
TGGAAACAATGAGAGAAAAACCTGTGGGGTCATTTTACAAATGGAATCGC
TAAATAGCAGTGCTTCTTGCTGGGTAATAGCATAGAACCTTTAAATCACA
GAGATTAGAGACAGGAGGTCTGGCAGGTCCCCTTGTCTACCTCCTGTAGC
AGCTTTGTGCATTTCCCATGAAATGACATGAGTCCTGAGCATTTGCTGTA
GCCCTGGGGGAACTTACTCCTGGGTAATATATATCCCTGTTGAGAAAATT
TCCCAGGGAACTGGCAAGCTTGTCTTTTGTTTAATATCACATTGTTCTGA
ATCTTTTCAGCCTTTGG

ATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTCACAGTCATCTATTGGATGGAACACAGGGCC
CCTAATGAAGGAGCTAGAGAAAGTACCAGAGGAGTTAAAGGGGTCTACAA
CCTTATAGGAGGATCACCAATATGAACTAACCAGTCCCCCCGCCCCAGAA
CTGTGTCTCTAGTTACATATGTACCCGTGGATAGCCTAGTTGGCCATCAA
TGGGAGGAGAGGTCCTTGGTCTTGTGAAGATCATATGCCCCAGTACAGGG
GAATGCCAGGGCCAGGAAGCGATAGTGGGTGGGTTGGTGAGCAGGGTGGG
GGGAGTGTTTTTCCTCCCCCCCCCCCCTTTTCTTTTCTCCTTTCCTATTA
TTTCTTCCCTTCCCCTGCATCAAAAAAAAAATTAATTTTCTCTCTGCCTT
CCCTCATTTTTCCTCCCCCCCCTCCCCCTTTTCCCCCTCCCCTTCTATAT
ATTTTCTTCCCCCCTTACTTATGTTTTTCCATTCCTTTTCCCCCCCCTCC
TCCTTCTCTTATCTCATTTTTCCCCCCATTTTTCATCTTACTACCATCCT
TTATTCCTTTTTTTTTCCTCCCTTTTCCCCGCCCCTCCATTTCGCCTCCC
TCCCCTTTTTTTTTTTTTTACCCCTCCTTCCCCCCCCCCTCCCCACTTTC
CCCTCTTCCCTGCGTTTTCCTCCATTCCCCCCCG

Query= MSMg01no087_g22.b1 MSMg01no087_g22.b1 CHROMAT_FILE:
MSMg01no087_g22.b1 PHD_FILE: MSMg01no087_g22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:33 2005
         (653 letters)



>mm_chr3_7680436_7681489
          Length = 1054

 Score = 1226 bits (634), Expect = 0.0
 Identities = 649/654 (99%), Gaps = 1/654 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtgcaataagctggtgttaaattagcacctctgtttgcttttttcttagacttgtcaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgcaataagctggtgttaaattagcacctctgtttgcttttttcttagacttgtcaaa 260

                                                                       
Query: 61  agaaagattaatgagcaggttttctgcactcaactatagcttttcttagaggaatgtggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaaagattaatgagcaggttttctgcactcaactatagcttttcttagaggaatgtggt 320

                                                                       
Query: 121 gtctacatcaaaatcccatttagatgcagaaaaactcacttgcaagcaaagat-accttt 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 gtctacatcaaaatcccatttagatgcagaaaaactcacttgcaagcaaagatgaccttt 380

                                                                       
Query: 180 tcacctttcttctagtttcccattcttatttttttcctagcaagcaaacatttactccta 239
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaactttcttctagtttcccattcttatttttttcctagcaagcaaacatttactccta 440

                                                                       
Query: 240 tttaggtgtccttcagcaaccttcccaaccctctgatgccatgtattattgtttgagtct 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttaggtgtccttcagcaaccttcccaaccctctgatgccatgtattattgtttgagtct 500

                                                                       
Query: 300 cactaagtaagatggaaaaaaaatgagagttcagcaaaggtggaaacaatgagagaaaaa 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cactaagtaagatggaaaaaaaatgagagttcagcaaaggtggaaacaatgagagaaaaa 560

                                                                       
Query: 360 cctgtggggtcattttacaaatggaatcgctaaatagcagtgcttcttgctgggtaatag 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctgtggggtcattttacaaatggaatcgctaaatagcagtgcttcttgctgggtaatag 620

                                                                       
Query: 420 catagaacctttaaatcacagagattagagacaggaggtctggcaggtccccttgtctac 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 catagaacctttaaatcacagagattagagacaggaggtctggcaggtccccttgtctac 680

                                                                       
Query: 480 ctcctgtagcagctttgtgcatttcccatgaaatgacatgagtcctgagcatttgctgta 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctcctgtagcagctttgtgcatttcccatgaaatgacatgagtcctgagcatttgctgta 740

                                                                       
Query: 540 gccctgggggaacttactcctgggtaatatatatccctgttgagaaaatttcccagggaa 599
           |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gccctggggggacttgctcctgggtaatatatatccctgttgagaaaatttcccagggaa 800

                                                                 
Query: 600 ctggcaagcttgtcttttgtttaatatcacattgttctgaatcttttcagcctt 653
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 801 ctggcaagcttgtcttttgtttaatatcacattgttctgcatcttttcagcctt 854


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1054
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1044
Effective search space:   671292
Effective search space used:   671292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)