Query= MSMg01no089_d11.b1 MSMg01no089_d11.b1 CHROMAT_FILE:
MSMg01no089_d11.b1 PHD_FILE: MSMg01no089_d11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:56 2005
(297 letters)
>mm_chr3_144814438_144815134
Length = 697
Score = 559 bits (289), Expect = e-164
Identities = 295/297 (99%)
Strand = Plus / Minus
Query: 1 ggtttactagcacaacaattatcaggtttaacatcagatcttaacctagttattagcagt 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 497 ggtttactagcacaacaattatcaggtttaacatcagatcttaacctatttattagcagt 438
Query: 61 tttcacaaagtactaaacacagaacagagaaatccatctcatgtcagcttattttttcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tttcacaaagtactaaacacagaacagagaaatccatctcatgtcagcttattttttcag 378
Query: 121 gggcttcaactgcacaaagaacatcacacattttagaatcctgatggggaggagtttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gggcttcaactgcacaaagaacatcacacattttagaatcctgatggggaggagtttgtt 318
Query: 181 tgctttcatgtagaaagccagcaaacttattagacaataagagcaaacagtatacatcaa 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 317 tgctttcatgtagaaagccagcaaacttattagacaataagagtaaacagtatacatcaa 258
Query: 241 aataatttaatttttgaaccctttagatttacaacctggaaatgaaaaaggagtttt 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aataatttaatttttgaaccctttagatttacaacctggaaatgaaaaaggagtttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 697
Length adjustment: 9
Effective length of query: 288
Effective length of database: 688
Effective search space: 198144
Effective search space used: 198144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no089_d11.g1 MSMg01no089_d11.g1 CHROMAT_FILE:
MSMg01no089_d11.g1 PHD_FILE: MSMg01no089_d11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:57 2005
(410 letters)
>mm_chr3_144671137_144671950
Length = 814
Score = 712 bits (368), Expect = 0.0
Identities = 401/414 (96%), Gaps = 4/414 (0%)
Strand = Plus / Plus
Query: 1 attacttccttatagctttcttaagtgcaagaaaagtgggcagaatttttcacttgggg- 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attacttccttatagctttcttaagtgcaagaaaagtgggcagaatttttcacttgggga 260
Query: 60 ---agcctagcctacagcccacatggacagagtaatcatcttgacctgtgctggaattca 116
|||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 261 gcaagcctagcctacagcccacatggatagagtaatcatcttgacatgtgctggaattca 320
Query: 117 tctctgctatttgaagatatgacagtatctctttgccagtaatggagagatagtagtacc 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctctgctatttgaagatatgacagtatctctttgccagtaatggagagatagtagtacc 380
Query: 177 taaaaagtgtggtgaacataaaaatgaagatgtctgcctgtgcatacattttgaggaggt 236
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 taaaaagtgtggtgaacataaaaatgaagatgtctgcctgtgcatactttttgaggaggt 440
Query: 237 tgtggacttgactgttatatttcttcccttagtttggaagggataaagttccgtgtagtc 296
||||||||||||||||||||||||||| ||||||||||| |||||| |||| |||||||
Sbjct: 441 tgtggacttgactgttatatttcttcctttagtttggaacggataacgttctgtgtagta 500
Query: 297 tctaatcctgttgagttcaaagcactaatgcactttagctctgtggaggctaaggctggg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 501 tctaatcctgttgagttcaaagcactaatgcactttagctctgtggaggctaaggttggg 560
Query: 357 cccttcctcacgtttctcagcattttgagatatgacatacatgagcatgcagag 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cccttcctcacgtttctcagcattttgagatatgacatacatgagcatgcagag 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 814
Length adjustment: 9
Effective length of query: 401
Effective length of database: 805
Effective search space: 322805
Effective search space used: 322805
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
