Query= MSMg01no092_a14.b1 MSMg01no092_a14.b1 CHROMAT_FILE:
MSMg01no092_a14.b1 PHD_FILE: MSMg01no092_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:45 2005
(347 letters)
>mm_chr3_65665168_65665914
Length = 747
Score = 663 bits (343), Expect = 0.0
Identities = 346/347 (99%)
Strand = Plus / Plus
Query: 1 ctgctttccagggctgctaacaagcattgggactgactgccccgtgagctctctcctctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgctttccagggctgctaacaagcattgggactgactgccccgtgagctctctcctctg 260
Query: 61 acaatgaagcaacagaaaggtcagcggccggacacagaaagaggagaagggtcctgaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaatgaagcaacagaaaggtcagcggccggacacagaaagaggagaagggtcctgaata 320
Query: 121 aacacagacagtttaatcaaccatgaagaaacccaagagttgactgaaagtgctttgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacacagacagtttaatcaaccatgaagaaacccaagagttgactgaaagtgctttgtca 380
Query: 181 gggcagaagggagggcctctgccctcggagaaaggcgaggaaggttggaggtcacctcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggcagaagggagggcctctgccctcggagaaaggcgaggaaggttggaggtcacctcac 440
Query: 241 tgaccacagaggctgccttggtgcaaatgttagtgggaagactcacaaaaaccagaaggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaccacagaggctgccttggtgcaaatgttagtgggaagactcacaaaaaccagaaggg 500
Query: 301 cttatagagagagaaagggaggggggagagagggagcaagagagagg 347
|||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttagagagagagaaagggaggggggagagagggagcaagagagagg 547
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_a14.g1 MSMg01no092_a14.g1 CHROMAT_FILE:
MSMg01no092_a14.g1 PHD_FILE: MSMg01no092_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:45 2005
(289 letters)
>mm_chr3_65793663_65794351
Length = 689
Score = 522 bits (270), Expect = e-153
Identities = 285/290 (98%), Gaps = 2/290 (0%)
Strand = Plus / Minus
Query: 1 actaagtagatcaggttggtctctactcacagagatcctcctgcctccgcctcctgagtg 60
||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 587 actaagtagatcaggttggtctctactcacaaagatcctcctgcctttgcctcctgagtg 528
Query: 61 ctagggttaaacaaaggtctacaccaccatgcccagctaaactaggcatctttgagaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ctagggttaaacaaaggtctacaccaccatgcccagctaaactaggcatctttgagaaac 468
Query: 121 aagatcatatttgacccttg-taagactcttgagtctaaatcttttaatactatactttt 179
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 467 aagatcatatttgacccttgat-agactcttgagtctaaatcttttaatactatactttt 409
Query: 180 ggaggccggtggaaaaaaattaaatggggactatattttttaaatattgtggcaacatta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ggaggccggtggaaaaaaattaaatggggactatattttttaaatattgtggcaacatta 349
Query: 240 aatttcttagaaattataaacatgttgtagctagtatatttataattgcc 289
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aatttcttagaaattataaacatgttgtagctagtatatttataattgcc 299
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
