Query= MSMg01no092_d05.b1 MSMg01no092_d05.b1 CHROMAT_FILE:
MSMg01no092_d05.b1 PHD_FILE: MSMg01no092_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:59 2005
(315 letters)
>mm_chr3_6232270_6232991
Length = 722
Score = 518 bits (268), Expect = e-151
Identities = 303/318 (95%), Gaps = 7/318 (2%)
Strand = Plus / Minus
Query: 5 gaattcttccttttac-tcacgaggtagaacctagctgataagagtagagcttaacaaac 63
|||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 522 gaattcttccttttacatcaggaggtagaacctaactgataagagtagagcttaacaaac 463
Query: 64 a------ccttgtgccttgatcgctcttgggaacgcatcataaaccaaagataagtcaca 117
| |||||||||||||| | ||||||||||||||||||||||||||||||| ||||
Sbjct: 462 acttgccccttgtgccttgattggtcttgggaacgcatcataaaccaaagataagccaca 403
Query: 118 tgacactaggtggcacagatcacaggtttcctcatcactttggtctcttgcttgctacaa 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tgacactaggtggcacagatcacaggtttcctcatcactttggtctcttgcttgctacaa 343
Query: 178 cctgatatctgggtgagaatcttctaaattacaattcttgatataatttgcattcattac 237
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 342 cctgatatctgggtgagaatcttctaaattacaattcttgatatactttgcattcattac 283
Query: 238 catgtgagtgcacacacgtgtgcttccaagcatttgctttagtatgtgttttaggattca 297
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 catgtgagtgcacacatgtgtgcttccaagcatttgctttagtatgtgttttaggattca 223
Query: 298 gctgtggttcagggtcct 315
|||||||||| |||||||
Sbjct: 222 gctgtggttcggggtcct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 722
Length adjustment: 9
Effective length of query: 306
Effective length of database: 713
Effective search space: 218178
Effective search space used: 218178
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_d05.g1 MSMg01no092_d05.g1 CHROMAT_FILE:
MSMg01no092_d05.g1 PHD_FILE: MSMg01no092_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:59 2005
(339 letters)
>mm_chr3_6110908_6111646
Length = 739
Score = 586 bits (303), Expect = e-172
Identities = 330/339 (97%)
Strand = Plus / Plus
Query: 1 taattttcttaccttaaatttgtgcatgtacccatcaaaatgaattgtctgctgctagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 taattttcttaccttaaatttgtgcatgtacccatcaaaatgaattgtctgttgctagct 260
Query: 61 ttgtttatagccatgtgtacctgacatcttatttattaccaaaagcagagaaaaattgtg 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 ttgtttatagccatgtgtacctgacatcttatttattacaaaaagcagagaaaaattgtg 320
Query: 121 ataatagactacagcacagtctgaaaagaggacttttgaattatcattttgaccagtgtt 180
||||||| ||| |||||||||||||||||| |||||||||| |||| |||||||||||||
Sbjct: 321 ataatagtctatagcacagtctgaaaagagtacttttgaatcatcactttgaccagtgtt 380
Query: 181 tctaatgataatgttatgactgtaaaccttctgcaactatgtgaatatttgctttgtatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctaatgataatgttatgactgtaaaccttctgcaactatgtgaatatttgctttgtatt 440
Query: 241 tattcagaaaatgttatatttttcacagatgagcttattacaaatgtttggaatttagtc 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattcagaaaatgttatatttttcacagatgagcttattacaaatgtttggaatttagtt 500
Query: 301 atttttttatgtcagttcttgttatttgcatgtcttgaa 339
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 501 atttgtttatgtcagttcttgttatttgcatgtcttgaa 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
