Query= MSMg01no092_i04.b1 MSMg01no092_i04.b1 CHROMAT_FILE:
MSMg01no092_i04.b1 PHD_FILE: MSMg01no092_i04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:23 2005
(320 letters)
>mm_chr3_17350621_17351339
Length = 719
Score = 557 bits (288), Expect = e-163
Identities = 309/316 (97%), Gaps = 1/316 (0%)
Strand = Plus / Plus
Query: 5 ttcttcctttctctgtagctttgtactgatttgtacttatggttcaccctcctttgctag 64
|||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 205 ttcttcctttctctgtagctttgtactgatttgtacttatggctcaaaatcctttgctag 264
Query: 65 tcactgtgtttaaagcttacaactgaaaaggcatcatggtgattaagaaacaagactctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcactgtgtttaaagcttacaactgaaaaggcatcatggtgattaagaaacaagactctt 324
Query: 125 ttaaaagggtcttctctgaaatattttgtttgaaaacatgaattagcacctgctttaaac 184
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttaaaagagtcttctctgaaatattttgtttgaaaacatgaattagcacctgctttaaac 384
Query: 185 actcatcattgaagggaaaattatatagatcacataaacttccaaaatatcaaaatcaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 actcatcattgaagggaaaattatatagatcacataaacttccaaaatatcaaaatcaac 444
Query: 245 atcaaagattaattagattttaaaatgatattgtgagtaattatgtagatttttattttt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atcaaagattaattagattttaaaatgatattgtgagtaattatgtagatttttattttt 504
Query: 305 tgttgcaatatttaga 320
|||| ||||||||||
Sbjct: 505 -gttgtaatatttaga 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 719
Length adjustment: 9
Effective length of query: 311
Effective length of database: 710
Effective search space: 220810
Effective search space used: 220810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_i04.g1 MSMg01no092_i04.g1 CHROMAT_FILE:
MSMg01no092_i04.g1 PHD_FILE: MSMg01no092_i04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:23 2005
(357 letters)
>mm_chr3_17483213_17483969
Length = 757
Score = 667 bits (345), Expect = 0.0
Identities = 354/357 (99%)
Strand = Plus / Minus
Query: 1 ctataaaacagaacatatttatatagatactttcacaatagggttaattttgcttgcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ctataaaacagaacatatttatatagatactttcacaatagggttaattttgcttgcaag 498
Query: 61 tttattccttaatctaggtgtctagaaaatgccacattaagggtacaaaatatgatatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tttattccttaatctaggtgtctagaaaatgccacattaagggtacaaaatatgatatca 438
Query: 121 ggtggatcttgtttaaatcataggctatctcatcccttacaagaaatggctgtaatcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ggtggatcttgtttaaatcataggctatctcatcccttacaagaaatggctgtaatcttg 378
Query: 181 gtttcttatgcagtatggctcacatatatgtcttagaatcttttcagtcttttgttaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gtttcttatgcagtatggctcacatatatgtcttagaatcttttcagtcttttgttaagg 318
Query: 241 attttgtgagcaatagtgattcagattcagctttctacagttaacataatttagaatgat 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 attttgtgagcaatagtgattcagattcagctttctacagttaacataatttagaatgac 258
Query: 301 agaaatccatatcacaaagctatacttaataaaccagatattcctaatatctgagca 357
||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 257 agaaatccatatcacaaagctatacttaataaaccagatgtttctaatatctgagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 357
Length of database: 757
Length adjustment: 9
Effective length of query: 348
Effective length of database: 748
Effective search space: 260304
Effective search space used: 260304
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
