Query= MSMg01no092_n14.b1 MSMg01no092_n14.b1 CHROMAT_FILE:
MSMg01no092_n14.b1 PHD_FILE: MSMg01no092_n14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:51 2005
(245 letters)
>mm_chr3_147979650_147980294
Length = 645
Score = 404 bits (209), Expect = e-117
Identities = 209/209 (100%)
Strand = Plus / Plus
Query: 37 atgtacacaaacatgtacaccctaaaaggtgttattatgaagcctaagtaagtttgcaag 96
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 atgtacacaaacatgtacaccctaaaaggtgttattatgaagcctaagtaagtttgcaag 296
Query: 97 gttcctgttggttttcattgttgaaaattaatttatagaattagaaggtttgtttctccc 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gttcctgttggttttcattgttgaaaattaatttatagaattagaaggtttgtttctccc 356
Query: 157 cattcaccacaacttacatttttgtgcatttatcagccactttcagtattagaaacacat 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 cattcaccacaacttacatttttgtgcatttatcagccactttcagtattagaaacacat 416
Query: 217 aagcagttggtttctcacccttatgcagt 245
|||||||||||||||||||||||||||||
Sbjct: 417 aagcagttggtttctcacccttatgcagt 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no092_n14.g1 MSMg01no092_n14.g1 CHROMAT_FILE:
MSMg01no092_n14.g1 PHD_FILE: MSMg01no092_n14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:51 2005
(291 letters)
>mm_chr3_148116589_148117282
Length = 694
Score = 522 bits (270), Expect = e-153
Identities = 288/294 (97%), Gaps = 3/294 (1%)
Strand = Plus / Minus
Query: 1 tataaagtgcgagatcgat-aaataatttctt-aaaaaaaatac-tatccatgtggatat 57
||||||||||||||||||| |||||||||||| |||||||| || ||| |||||||||||
Sbjct: 494 tataaagtgcgagatcgataaaataatttcttaaaaaaaaagacatatacatgtggatat 435
Query: 58 tctaccctggccaatatttaaaataaggaaatagaaataaagttcagagcagatcacttg 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tctaccctggccaatatttaaaataaggaaatagaaataaagttcagagcagatcacttg 375
Query: 118 gtgtggatgagtaatttcatatccattgcttttacaggggagtgctgtggaaagtccatt 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gtgtggatgagtaatttcatatccattgcttttacaggggagtgctgtggaaagtccatt 315
Query: 178 ttatgaataacattcagctgcaggctgacacctctcttttctctctctacctcactccta 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ttatgaataacattcagctgcaggctgacacctctcttttctctctctacctcactccta 255
Query: 238 tgtctttgagtattaatggagggacgagcaacttcattacatgttgtgctctgt 291
|||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tgtctttgagcattaatggagggacgagcaacttcattacatgttgtgctctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 694
Length adjustment: 9
Effective length of query: 282
Effective length of database: 685
Effective search space: 193170
Effective search space used: 193170
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
