Query= MSMg01no092_p03.b1 MSMg01no092_p03.b1 CHROMAT_FILE:
MSMg01no092_p03.b1 PHD_FILE: MSMg01no092_p03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:58 2005
(502 letters)
>mm_chr3_58752892_58753793
Length = 902
Score = 930 bits (481), Expect = 0.0
Identities = 493/497 (99%), Gaps = 1/497 (0%)
Strand = Plus / Minus
Query: 7 gaattcactaaagagtc-cacatcaaaatgaaaacaaatgtgggtgatatggaatggctc 65
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 gaattcactaaagagtcacacatcaaaatgaaaacaaatgtgggtgatatggaatggctc 801
Query: 66 atgcctgtactcccagcagggtgtggctgtatcagaaggctttggaatttgagacccagc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 atgcctgtactcccagcagggtgtggctgtatcagaaggctttggaatttgagacccagc 741
Query: 126 ctgggctacatagggagatctgtctcaataaaacaaaacaaacaaaacctccaaaaagaa 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ctgggctacatagggagatctgtctcaataaaacaaaacaaacaaaacctccaaaaagaa 681
Query: 186 agaaaagcggaggaagtaacatgtttacaactataacacccctgtgagccatggaaaaat 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agaaaagcggaggaagtaacatgtttacaactataacacccctgtgagccatggaaaaat 621
Query: 246 tagcttccttagagggttacagatagtactagatcatagtgttcagggggaaaggctaat 305
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 620 tagcttccttagagggttacagatagtactaggtcatagtgttcagggggaaaggctaat 561
Query: 306 tacaaactacagagatagagcttaaccaagttaggccacctctttattgactatgtatgt 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tacaaactacagagatagagcttaaccaagttaggccacctctttattgactatgtatgt 501
Query: 366 atttcctaattgttctaataataatacaaaaacatcactgttaaagtgtaaggtagaggt 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atttcctaattgttctaataataatacaaaaacatcactgttaaagtgtaaggtagaggt 441
Query: 426 ttcttattttcagatccttttatatacattatgattccacaaatatttttgcccagaata 485
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 440 ttcttgttttcagatccttttatatgcattatgattccacaaatatttttgcccagaata 381
Query: 486 atatttaaatgtgctct 502
|||||||||||||||||
Sbjct: 380 atatttaaatgtgctct 364
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no092_p03.g1 MSMg01no092_p03.g1 CHROMAT_FILE:
MSMg01no092_p03.g1 PHD_FILE: MSMg01no092_p03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:46:58 2005
(320 letters)
>mm_chr3_58682525_58683244
Length = 720
Score = 518 bits (268), Expect = e-151
Identities = 313/338 (92%), Gaps = 18/338 (5%)
Strand = Plus / Plus
Query: 1 caggatagccagggctacatagtgagacactgtctcatccaagtacatacccgagcactc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 183 caggatagccagggctacatagtgagacactgtctcatccaagtacatacatgagcactc 242
Query: 61 gcgtgcgcgcgcgc----acacacacacacacacatacacacacacacacacacacacac 116
|||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 243 gcgtgcgcgcgcgcgcgcacacacacacacacacacacacacacacacacacacacacac 302
Query: 117 a------------taaa--cacacacacacaaacacactccaaaaaagcagtaacttgag 162
| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aaacacacacacataaatacacacacacacaaacacactccaaaaaagcagtaacttgag 362
Query: 163 gttttctttctcggtattctgggacagtaagtggcctgccgtcagtgcacgggatgagtt 222
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 363 gttttctttctcggtattctgggacagtaagtggcctgccatcagtgcacgggatgagtt 422
Query: 223 agaggaagagaaggctggtacattgcactttaatgcactaggccacatggctgcaattct 282
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 423 agaggaagagaaggctggtacattgtactttaatgcactaggccacatggctgcaattct 482
Query: 283 gattgttaagtagtgctgactctgttggccttttgata 320
|||||||||| |||||||| ||||||||||||||||||
Sbjct: 483 gattgttaagcagtgctgattctgttggccttttgata 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
