Query= MSMg01no093_a14.b1 MSMg01no093_a14.b1 CHROMAT_FILE:
MSMg01no093_a14.b1 PHD_FILE: MSMg01no093_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:08 2005
(169 letters)
>mm_chr3_66490012_66490580
Length = 569
Score = 311 bits (161), Expect = 1e-89
Identities = 167/169 (98%)
Strand = Plus / Minus
Query: 1 ggtccaaactcaggtcaataaagctatctcttaacttttagggtgggcttctgacttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ggtccaaactcaggtcaataaagctatctcttaacttttagggtgggcttctgacttctt 310
Query: 61 cttctgtatttgatgctttggcttcacctacattttgttcatttcttcctctgctctgag 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 309 cttctgtatttgatgctttggcttcacctacattttgttcatttcttcctctgccctgag 250
Query: 121 actgcttttactttctgccaacggtgttaaccgggtcacactgctgagg 169
|||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 actgtttttactttctgccaacggtgttaaccgggtcacactgctgagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 569
Length adjustment: 8
Effective length of query: 161
Effective length of database: 561
Effective search space: 90321
Effective search space used: 90321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no093_a14.g1 MSMg01no093_a14.g1 CHROMAT_FILE:
MSMg01no093_a14.g1 PHD_FILE: MSMg01no093_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:47:08 2005
(360 letters)
>mm_chr3_66358990_66359749
Length = 760
Score = 507 bits (262), Expect = e-148
Identities = 347/404 (85%), Gaps = 48/404 (11%)
Strand = Plus / Plus
Query: 1 caatcttccacccttcagcgcctgccaacattctcaagtttatgtctttgtcaaccaagg 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatcttccagccttcagcgcctgccaacattctcaagtttatgtctttgtcaaccaagg 260
Query: 61 atggaaaccctagatgaagccagagcaagtctaagtttacaacttttgtctagaagggat 120
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggaaaaactagatgaagccagagcaagtctaagtttacaacttttgtctagaagggat 320
Query: 121 ttattttgcttgatttttttcctttctttctttctttctttctttctttctttctttctt 180
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 ttattttgcttgatctttttcctttctttctgtctttctttctttctttctttctttctt 380
Query: 181 tctttctttctttctttctttctttctttctttcttccttccttccttccttcctccctc 240
|||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||
Sbjct: 381 tctttctttctttctttctttcttcctt-c---cttccttccttccttccttcctccctc 436
Query: 241 tctctctctctctctttctttctttctttctttctttct--------------------- 279
|||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tctctctctctctctttctttctttctttctttctttctctctctctctctctctctctc 496
Query: 280 ---------------ttctttttttctttctt-ctttctt-------acctgatgttaat 316
|||||| |||||||||| ||||||| | |||||||||||
Sbjct: 497 tctctctctctctctttctttctttctttctttctttcttttttcttaactgatgttaat 556
Query: 317 tttaaggaaatttacgttcaagtgtctctgaattttttaactca 360
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Sbjct: 557 tttaaggaaatttaggttcaagtgtctctgaattttttaactca 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 145
Number of extensions: 42
Number of successful extensions: 42
Number of sequences better than 10.0: 1
Number of HSP's gapped: 36
Number of HSP's successfully gapped: 5
Length of query: 360
Length of database: 760
Length adjustment: 9
Effective length of query: 351
Effective length of database: 751
Effective search space: 263601
Effective search space used: 263601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
