Query= MSMg01no094_f17.b1 MSMg01no094_f17.b1 CHROMAT_FILE:
MSMg01no094_f17.b1 PHD_FILE: MSMg01no094_f17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:58 2005
(180 letters)
>mm_chr3_118941713_118942292
Length = 580
Score = 348 bits (180), Expect = e-100
Identities = 180/180 (100%)
Strand = Plus / Plus
Query: 1 cagatattctctatacagcaacatgcaatcacatttaggcaaaagaactattcctttttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagatattctctatacagcaacatgcaatcacatttaggcaaaagaactattcctttttc 260
Query: 61 tttttttcaatagtcattgaagctctgctttggaaaattaaaatgaaaaaaaattttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttttttcaatagtcattgaagctctgctttggaaaattaaaatgaaaaaaaattttggt 320
Query: 121 accacatatctgataaaatgtaaagcaaagacacaacctgctcaaacgttttcattcgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 accacatatctgataaaatgtaaagcaaagacacaacctgctcaaacgttttcattcgtg 380
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 180
Length of database: 580
Length adjustment: 8
Effective length of query: 172
Effective length of database: 572
Effective search space: 98384
Effective search space used: 98384
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no094_f17.g1 MSMg01no094_f17.g1 CHROMAT_FILE:
MSMg01no094_f17.g1 PHD_FILE: MSMg01no094_f17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:49:58 2005
(446 letters)
>mm_chr3_119048527_119049372
Length = 846
Score = 832 bits (430), Expect = 0.0
Identities = 442/446 (99%), Gaps = 1/446 (0%)
Strand = Plus / Minus
Query: 1 ttactctgatttagagatggcagtgcatggtatgaacatttaagaacaccgtggaatcaa 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 469 ttactctgatttagagatggcagtgcatggtatgaacatttaagaacaacgtggaatcaa 410
Query: 61 tcgaatcttcaaattgtttaagttcagaatttgaaggttttctacctaagtgtgtgttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 tcgaatcttcaaattgtttaagttcagaatttgaaggttttctacctaagtgtgtgttct 350
Query: 121 ttctctgaggctacttcacaatccttctctttggtagatgatgtttggagaattccattt 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ttctctgaggctacttcacattccttctctttggtagatgatgtttggagaattccattt 290
Query: 181 tgattaatggagatctctcctgtttggcgttggttgctggctttttcattatatagaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tgattaatggagatctctcctgtttggcgttggttgctggctttttcattatatagaaat 230
Query: 241 atctaaaagcactcagttcggtctaaattggggctggagaagtggctcagtggttaagag 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 229 atctaaaagcactcagttcggtctaaatt-gggctggagaagtggctcagtggttaagag 171
Query: 301 cacaaactactcttgcacaggacctaagttcagctctcagcactcatatcaggtagttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 cacaaactactcttgcacaggacctaagttcagctctcagcactcatatcaggtagttca 111
Query: 361 gggctacctgtaactccagctccaggatagaccgtgaacttggattcatgtgaacagaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 gggctacctgtaactccagctccaggatagaccgtgaacttggattcatgtgaacagaca 51
Query: 421 cactcatactcataattaaaaatata 446
||||||||| ||||||||||||||||
Sbjct: 50 cactcatacacataattaaaaatata 25
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
