Query= MSMg01no094_h07.b1 MSMg01no094_h07.b1 CHROMAT_FILE:
MSMg01no094_h07.b1 PHD_FILE: MSMg01no094_h07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:07 2005
(201 letters)
>mm_chr3_85618342_85618941
Length = 600
Score = 335 bits (173), Expect = 1e-96
Identities = 191/197 (96%), Gaps = 1/197 (0%)
Strand = Plus / Plus
Query: 5 gaattctgcgtacgcgcacctcctcaggacgccccgtgtgcgttatgctgtgctgtctgg 64
|||||||||| ||| ||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 205 gaattctgcggacg-gcacctcctcaggacaccccgtgtgtgttatgctgtgctgtctgg 263
Query: 65 atgcgttaaaccccatttcagatcaatttaccatttgtgttcctgctgtgcaccttcagt 124
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atgcgttaaagtccatttcagatcaatttaccatttgtgttcctgctgtgcaccttcagt 323
Query: 125 gtctgtgatcttttcctcccaagacatgcatgtgaatgttagatcccttcattatccaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtctgtgatcttttcctcccaagacatgcatgtgaatgttagatcccttcattatccaag 383
Query: 185 tcactgttactcctaca 201
|||||||||||||||||
Sbjct: 384 tcactgttactcctaca 400
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 201
Length of database: 600
Length adjustment: 8
Effective length of query: 193
Effective length of database: 592
Effective search space: 114256
Effective search space used: 114256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no094_h07.g1 MSMg01no094_h07.g1 CHROMAT_FILE:
MSMg01no094_h07.g1 PHD_FILE: MSMg01no094_h07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:07 2005
(389 letters)
>mm_chr3_85778848_85779636
Length = 789
Score = 737 bits (381), Expect = 0.0
Identities = 387/389 (99%)
Strand = Plus / Minus
Query: 1 gttgactgtctgggctggcccacgtaaatcaatcacagaatctcttaagcagccaagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gttgactgtctgggctggcccacgtaaatcaatcacagaatctcttaagcagccaagaaa 330
Query: 61 cccagaatgaagtataaactccagtggatctctccgtgcacatctcagtgtttttcaact 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 329 cccagaatgaagtataaactccagtggatctctccgtgcgcatctcagtgtttttcaact 270
Query: 121 gatctgttcaaaaagacccaaaagcatcaaaatatctgggagcatgttaagaatattctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gatctgttcaaaaagacccaaaagcatcaaaatatctgggagcatgttaagaatattctc 210
Query: 181 agatctcaacctgtgagatggctcagcggacaaaggtgaccagtggcctgagcttcatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 agatctcaacctgtgagatggctcagcggacaaaggtgaccagtggcctgagcttcatcc 150
Query: 241 ctacggcccacatggcggaagaagagaagactccagcaagctgtcctctggcacgaatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 ctacggcccacatggcggaagaagagaagactccagcaagctgtcctctggcacgaatac 90
Query: 301 aaaataaacaagttgcgattaaaaaaaaaaaaaaagagtattttcagaccttatcccaaa 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 aaaataaacaagttgtgattaaaaaaaaaaaaaaagagtattttcagaccttatcccaaa 30
Query: 361 accgatggggatcagagatttgagagggc 389
|||||||||||||||||||||||||||||
Sbjct: 29 accgatggggatcagagatttgagagggc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 789
Length adjustment: 9
Effective length of query: 380
Effective length of database: 780
Effective search space: 296400
Effective search space used: 296400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
