Query= MSMg01no095_i06.b1 MSMg01no095_i06.b1 CHROMAT_FILE:
MSMg01no095_i06.b1 PHD_FILE: MSMg01no095_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:33 2005
(624 letters)
>mm_chr3_132132128_132133151
Length = 1024
Score = 1065 bits (551), Expect = 0.0
Identities = 606/646 (93%), Gaps = 35/646 (5%)
Strand = Plus / Plus
Query: 7 gaattcaattttctttcttcccaccatgcctcgtgttccctttttatttaatatacttta 66
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 179 gaattcaattttctttcttcccaccatgcctcgttttccctttttacttaatatacttta 238
Query: 67 aaatgcctgccatcgagtaaaagataa----agtcaccttaataacatgattattattat 122
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 239 aaatgcctgccatcgagtaaaagataattaaagtcaccttaataacatgattattattat 298
Query: 123 tattattat------------------------aacatggtgattatttaaactctgctg 158
||||||||| |||||||||||||||||||||||||||
Sbjct: 299 tattattattattattattattattattattataacatggtgattatttaaactctgctg 358
Query: 159 ctatctatgtgggagtatctttgaaatatgcatgatgatgagacactgatcctcagaagg 218
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ctatctatgtgggagtgtctttgaaatatgcatgatgatgagacactgatcctcagaagg 418
Query: 219 gttttgttgtgtgatggacaaggggcacatgccatcagaagggcctaaaagctaccattc 278
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 419 gttttgttgtgtgatggacacggggca-------tcagaagggcctaaaagctaccattc 471
Query: 279 tctctgctcctggcttgaaatggaatccattgttttctcctacctgaactctcacccctg 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 tctctgctcctggcttgaaatggaatccattgttttctcctacctgaactctcacccctg 531
Query: 339 ctttttgccactaatgtgagatgaacagcaccagaactgagccactgtgcatcaccctgt 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ctttttgccactaatgtgagatgaacagcaccagaactgagccactgtgcatcaccctgt 591
Query: 399 gattgttttttaagttgtctgtgtcgaatagtgacaaatctcaactaacccagaaggtaa 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gattgttttttaagttgtctgtgtcgaatagtgacaaatctcaactaacccagaaggtaa 651
Query: 459 atccacggtgatgcacgtggaggaaagaagaggggactccgtatggtctagcctgacagg 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 atccacggtgatgcacgtggaggaaagaagaggggactccgtatggtctagcctgacagg 711
Query: 519 atgcacaccctaattttccatgaaagatttattttanaatgaatccttttcttctctcta 578
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 712 atgcacaccctaattttccatgaaagatttattttaaaatgaatccttttcttctctcta 771
Query: 579 taactctgggtgtcctgaaactgggtgccggctgaccagttaagct 624
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 taactctgggtgtcctgaaactgggtgccggctgaccagttaagct 817
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_i06.g1 MSMg01no095_i06.g1 CHROMAT_FILE:
MSMg01no095_i06.g1 PHD_FILE: MSMg01no095_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:33 2005
(614 letters)
>mm_chr3_132207873_132208886
Length = 1014
Score = 491 bits (254), Expect = e-143
Identities = 266/270 (98%)
Strand = Plus / Minus
Query: 1 actttcagaggcaggatgatagagacatggaaacaggaaggagacacacggctgcaccta 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 311 actttcagaggcaggatgatagagacatggaaacaggaagaagacacacggctgcaccta 252
Query: 61 aagaaaaaccaaagtggggctggagagatagctcagcccttcaaggctaggcttacttca 120
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aagaaaaaccaaattagggctggagagatagctcagcccttcaaggctaggcttacttca 192
Query: 121 aaagcctgtactttaaaaaactggaaaatctaattgaaatggacgaatttctagatagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aaagcctgtactttaaaaaactggaaaatctaattgaaatggacgaatttctagatagat 132
Query: 181 gtcacatagcaaagttaaacggagggcaggtaaaccatagaaacagtcctataacctcta 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 131 gtcacatagcaaagttaaacggagggcaggtaaaccatcgaaacagtcctataacctcta 72
Query: 241 aggaaatagaagcagtcattaaaagtctcc 270
||||||||||||||||||||||||||||||
Sbjct: 71 aggaaatagaagcagtcattaaaagtctcc 42
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
